WormBase Tree Display for Gene: WBGene00020581
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| WBGene00020581 | SMap | S_parent | Sequence | T19D12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T19D12.6 | |||||||
| Molecular_name | T19D12.6 | ||||||||
| T19D12.6.1 | |||||||||
| CE40124 | |||||||||
| Other_name | CELE_T19D12.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | T19D12.6 | ||||||||
| DB_info | Database | AceView | gene | 2G928 | |||||
| WormQTL | gene | WBGene00020581 | |||||||
| WormFlux | gene | WBGene00020581 | |||||||
| NDB | locus_tag | CELE_T19D12.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020581|UniProtKB=Q22574 | |||||||
| family | PTHR15036 | ||||||||
| NCBI | gene | 174097 | |||||||
| RefSeq | protein | NM_062949.10 | |||||||
| TrEMBL | UniProtAcc | Q22574 | |||||||
| UniProt_GCRP | UniProtAcc | Q22574 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (77) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00002174 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00016751 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00001328 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00002247 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00002248 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00006432 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00006746 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00006787 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00016913 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00018304 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including distal tip cell; head ganglion; interfacial epithelial cell; neurons; and rectum based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including skn-1; glp-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Concanavalin A-like lectin/glucanase domain superfamily; Laminin G domain; and Coagulation Factor Xa inhibitory site. Is an ortholog of human EGFLAM (EGF like, fibronectin type III and laminin G domains). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T19D12.6 | |||||||
| Corresponding_CDS_history | T19D12.6:wp94 | ||||||||
| T19D12.6:wp130 | |||||||||
| T19D12.6:wp156 | |||||||||
| Corresponding_transcript | T19D12.6.1 | ||||||||
| Other_sequence (12) | |||||||||
| Associated_feature (18) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00018846 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00053535 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013055 | ||||||||
| Expr1038969 | |||||||||
| Expr1157102 | |||||||||
| Expr2006262 | |||||||||
| Expr2024480 | |||||||||
| Drives_construct | WBCnstr00025033 | ||||||||
| Construct_product | WBCnstr00025033 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (196) | |||||||||
| Interaction | WBInteraction000266983 | ||||||||
| WBInteraction000543733 | |||||||||
| WBInteraction000543802 | |||||||||
| WBInteraction000544717 | |||||||||
| Map_info | Positive | Positive_clone | T19D12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -0.0524324 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060275 | |||||||||
| WBPaper00064099 | |||||||||
| Method | Gene |
