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WormBase Tree Display for Gene: WBGene00020581

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Name Class

WBGene00020581SMapS_parentSequenceT19D12
IdentityVersion1
NameSequence_nameT19D12.6
Molecular_nameT19D12.6
T19D12.6.1
CE40124
Other_nameCELE_T19D12.6Accession_evidenceNDBBX284602
Public_nameT19D12.6
DB_infoDatabaseAceViewgene2G928
WormQTLgeneWBGene00020581
WormFluxgeneWBGene00020581
NDBlocus_tagCELE_T19D12.6
PanthergeneCAEEL|WormBase=WBGene00020581|UniProtKB=Q22574
familyPTHR15036
NCBIgene174097
RefSeqproteinNM_062949.10
TrEMBLUniProtAccQ22574
UniProt_GCRPUniProtAccQ22574
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:03WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar01695555
WBVar01499702
WBVar01783891
WBVar01783892
WBVar01783893
WBVar01783894
WBVar01783895
WBVar01783896
WBVar00263893
WBVar00321600
WBVar00303100
WBVar00303101
WBVar01498435
WBVar01604057
WBVar00299565
WBVar01902573
WBVar02108145
WBVar01826591
WBVar01626637
WBVar01240513
WBVar00739339
WBVar00739340
WBVar00739341
WBVar00739342
WBVar00368600
WBVar00739343
WBVar00368601
WBVar00368602
WBVar00739344
WBVar00368603
WBVar00739345
WBVar00368604
WBVar00739346
WBVar00368605
WBVar00739347
WBVar00368606
WBVar00739348
WBVar00368607
WBVar00739349
WBVar00739350
WBVar00368608
WBVar00368609
WBVar00739351
WBVar00739352
WBVar00739353
WBVar00739354
WBVar00739355
WBVar00739356
WBVar00172680
WBVar00739357
WBVar00172681
WBVar00739358
WBVar01374234
WBVar00739359
WBVar02012103
WBVar00739360
WBVar00739361
WBVar00739362
WBVar00739363
WBVar00739364
WBVar00739365
WBVar02130131
WBVar00739366
WBVar00739367
WBVar00739368
WBVar00739369
WBVar00739370
WBVar00739371
WBVar02033369
WBVar00739372
WBVar00739373
WBVar00739374
WBVar00739375
WBVar00739376
WBVar00739377
WBVar00739378
WBVar00317902
RNASeq_FPKM (74)
Ortholog (31)
ParalogWBGene00002174Caenorhabditis elegansFrom_analysisPanther
WBGene00016751Caenorhabditis elegansFrom_analysisPanther
WBGene00001328Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00002247Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00002248Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00006432Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00006746Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00006787Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00016913Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018304Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in several structures, including distal tip cell; head ganglion; interfacial epithelial cell; neurons; and rectum based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including skn-1; glp-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Concanavalin A-like lectin/glucanase domain superfamily; Laminin G domain; and Coagulation Factor Xa inhibitory site. Is an ortholog of human EGFLAM (EGF like, fibronectin type III and laminin G domains).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST19D12.6
Corresponding_CDS_historyT19D12.6:wp94
T19D12.6:wp130
T19D12.6:wp156
Corresponding_transcriptT19D12.6.1
Other_sequence (12)
Associated_feature (18)
Experimental_infoRNAi_resultWBRNAi00018846Inferred_automaticallyRNAi_primary
WBRNAi00053535Inferred_automaticallyRNAi_primary
Expr_patternExpr1013055
Expr1038969
Expr1157102
Expr2006262
Expr2024480
Drives_constructWBCnstr00025033
Construct_productWBCnstr00025033
Microarray_results (22)
Expression_cluster (196)
InteractionWBInteraction000266983
WBInteraction000543733
WBInteraction000543802
WBInteraction000544717
Map_infoPositivePositive_cloneT19D12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII-0.0524324
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00060275
WBPaper00064099
MethodGene