WormBase Tree Display for Gene: WBGene00020163

WBGene00020163 SMap: S_parent: Sequence: T02G5
  Identity: Version: 3
    Name: Sequence_name: T02G5.3
      Molecular_name: T02G5.3
        T02G5.3.1
        CE47345
      Other_name: CELE_T02G5.3 Accession_evidence: NDB BX284602
      Public_name: T02G5.3
    DB_info: Database: AceView gene 2H383
        WormQTL gene WBGene00020163
        WormFlux gene WBGene00020163
        NDB locus_tag CELE_T02G5.3
        Panther gene CAEEL|WormBase=WBGene00020163|UniProtKB=Q22107
          family PTHR46819
        NCBI gene 187991
        RefSeq protein NM_063061.4
        TrEMBL UniProtAcc Q22107
        UniProt_GCRP UniProtAcc Q22107
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 06 Feb 2012 10:09:42 WBPerson1867 Event: Acquires_merge: WBGene00020161
        3 06 Feb 2012 10:09:42 WBPerson1867 Event: Acquires_merge: WBGene00020162
      Acquires_merge: WBGene00020161
        WBGene00020162
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (96)
    Strain: WBStrain00032611
      WBStrain00033155
    Component_of_genotype: WBGenotype00000050
    RNASeq_FPKM (74)
    GO_annotation: 00074207
      00074208
      00074209
    Ortholog (35)
    Paralog (16)
    Structured_description: Automated_description: Predicted to be involved in positive regulation of protein localization to ciliary membrane. Predicted to be located in ciliary membrane. Predicted to be part of plasma membrane protein complex. Is an ortholog of human EFCAB7 (EF-hand calcium binding domain 7). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T02G5.3
    Corresponding_CDS_history: T02G5.3:wp230
    Corresponding_transcript: T02G5.3.1
    Associated_feature: WBsf644351
  Experimental_info: RNAi_result: WBRNAi00018034 Inferred_automatically: RNAi_primary
      WBRNAi00052226 Inferred_automatically: RNAi_primary
      WBRNAi00052227 Inferred_automatically: RNAi_primary
      WBRNAi00018029 Inferred_automatically: RNAi_primary
      WBRNAi00035067 Inferred_automatically: RNAi_primary
      WBRNAi00052219 Inferred_automatically: RNAi_primary
      WBRNAi00018035 Inferred_automatically: RNAi_primary
      WBRNAi00061871 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017514
      Expr1038767
      Expr1155852
      Expr1155858
      Expr1155859
      Expr2005752
      Expr2023966
    Drives_construct: WBCnstr00025331
    Construct_product: WBCnstr00025331
    Microarray_results (39)
    Expression_cluster: WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_CoreEnriched
      WBPaper00037950:all-neurons_embryo_enriched
      WBPaper00037950:all-neurons_embryo_SelectivelyEnriched
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_larva_enriched
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:BAG-neuron_embryo_enriched
      WBPaper00037950:BAG-neuron_embryo_SelectivelyEnriched
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:dopaminergic-neurons_CoreEnriched
      WBPaper00037950:dopaminergic-neurons_embryo_enriched
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:dopaminergic-neurons_larva_enriched
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038168:lin-15B(n744)_upregulated
      WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
      WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00040285:H2S_24hr_upregulated
      WBPaper00040560:hpl-2_embryo_upregulated
      WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray
      WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
      WBPaper00042561:smg-2(RNAi)_downregulated
      WBPaper00042561:smgl-1(RNAi)_downregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045390:ubc-9(RNAi)_downregulated
      WBPaper00045521:Oogenic
      WBPaper00045774:clk-1_downregulated
      WBPaper00046805:csr-1(RNAi)_downregulated_Set1
      WBPaper00046805:csr-1(RNAi)_downregulated_Set2
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_expressed
      WBPaper00049177:rpn-10(ok1865)_upregulated
      WBPaper00049377:MWCNT_upregulated
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00050163:chd-3(eh4)_upregulated_24-cell-embryo
      WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
      WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051558:aging_regulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053295:lin-22(ot269)_upregulated
      WBPaper00054493:hpl-2(tm1489)_downregulated
      WBPaper00055013:hmg-3(bar24)_upregulated
      WBPaper00055060:flr-1(RNAi)_upregulated
      WBPaper00055103:thoc-5(wy822)_upregulated
      WBPaper00055354:Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin_upregulated
      WBPaper00055354:Rifampicin-Psora_upregulated
      WBPaper00055386:daf-2(e1370)_downregulated
      WBPaper00055482:pmt-2(RNAi)_downregulated
      WBPaper00056034:pals-22(jy3)_downregulated
      WBPaper00056167:Cry5B_upregulated
      WBPaper00056443:DietaryRestriction_upregulated
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056826:SGP_biased
      WBPaper00057041:spc-1(cas971)_downregulated
      WBPaper00057041:unc-70(cas983)_downregulated
      WBPaper00057288:Cold_upregulated_transcript
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058725:sftb-1(cer6)_upregulated
      WBPaper00059471:EGL-43_interacting
      WBPaper00059605:mut-16(pk710)_downregulated
      WBPaper00059728:5ug_cholesterol_downregulated
      WBPaper00059728:20ug_cholesterol_downregulated
      WBPaper00060399:pqm-1(ok485)_downregulated_CoCl2_6hr
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060764:swsn-1(os22ts)_downregulated
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061203:let-418(n3536)_downregulated
      WBPaper00061340:ADE
      WBPaper00061340:ADF
      WBPaper00061340:ADF_AWB
      WBPaper00061340:ADL
      WBPaper00061340:AFD
      WBPaper00061340:ASE
      WBPaper00061340:ASG
      WBPaper00061340:ASG_AWA
      WBPaper00061340:ASH
      WBPaper00061340:ASI
      WBPaper00061340:ASI_parent
      WBPaper00061340:ASJ
      WBPaper00061340:ASK
      WBPaper00061340:ASK_parent
      WBPaper00061340:AUA
      WBPaper00061340:AWA
      WBPaper00061340:AWB
      WBPaper00061340:AWC
      WBPaper00061340:BAG
      WBPaper00061340:CEP
      WBPaper00061340:IL1
      WBPaper00061340:IL1_parent
      WBPaper00061340:IL2
      WBPaper00061340:Neuroblast_ADE_ADA
      WBPaper00061340:Neuroblast_HSN_PHB
      WBPaper00061340:Neuroblast_URX_CEPDx
      WBPaper00061340:OLL
      WBPaper00061340:OLL_parent
      WBPaper00061340:OLQ
      WBPaper00061340:OLQ_parent
      WBPaper00061340:URX
      WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
      WBPaper00061527:rab-28-jbts-14_9542
      WBPaper00061651:ADF_enriched
      WBPaper00061651:ADL_enriched
      WBPaper00061651:ASER_enriched
      WBPaper00061651:IL2_LR_enriched
      WBPaper00061651:PHA_enriched
      WBPaper00061651:PHB_enriched
      WBPaper00061651:PQR_enriched
      WBPaper00061952:daf-18(nr2037)_upregulated
      WBPaper00062103:neuron_enriched
      WBPaper00062146:MOG-7-degron_1h_regulated
      WBPaper00062146:MOG-7-degron_2h_regulated
      WBPaper00062156:jmjd-5(zr1234)_updownregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062193:hsf-1(RNAi)_downregulated
      WBPaper00062193:skn-1(RNAi)_downregulated
      WBPaper00062456:doxycycline_downregulated_CB4856_transcript
      WBPaper00062456:doxycycline_downregulated_N2_transcript
      WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium
      WBPaper00062672:let-418(n3536)dcp-66(RNAi)_downregulated
      WBPaper00062672:let-418(n3536)_downregulated
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064156:lipl-4(overexpress)_downregulated
      WBPaper00064716:paraquat_upregulated
      WBPaper00064769:him-17(me24)_downregulated
      WBPaper00065005:sams-3(RNAi)_downregulated
      WBPaper00065005:sams-4(RNAi)_downregulated
      WBPaper00065096:25C_vs_20C_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065841:25_0
      WBPaper00065841:25_1
      WBPaper00065841:39_0
      WBPaper00065841:39_1
      WBPaper00065841:39_2
      WBPaper00065841:39_3
      WBPaper00065841:47_0
      WBPaper00065841:71_0
      WBPaper00065841:84_0
      WBPaper00065841:101_0
      WBPaper00065975:P-body_vs_WholeAnimal_enriched
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066110:Doxorubicin_downregulated_diploid
      WBPaper00066110:tetraploid_vs_diploid_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4489_group_2
      cgc4489_group_5
      cgc4489_group_21
      WBPaper00005124:progesterone_10-7M_regulated
      WBPaper00024393:strongly_regulated_dauer_genes
      WBPaper00024671:AFD_AWB_vs_unsorted_upregulated
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00027111:rde-3(r459)_downregulated
      WBPaper00027111:rrf-1(pk1417)_downregulated
      WBPaper00027111:rrf-3(pk1426)_downregulated
      WBPaper00029437:dcr-1_downregulated
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00030985:Enterococcus_faecalis_downregulated
      WBPaper00030985:Enterococcus_faecalis_upregulated
      WBPaper00032948:StarveUp2
      WBPaper00032948:StarveUp4
      WBPaper00034739:TreatmentAffectedGenes
      WBPaper00036286:Pattern_B
      WBPaper00039866:ClassComp_daf-19_downregulated
      WBPaper00039866:SAM_daf-19_downregulated
      WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2down
      WBPaper00040823:alg-1(gk214)_downregulated
      WBPaper00040858:eQTL_age_regulated_aging
      WBPaper00040963:Q100_down
      WBPaper00040963:Q200_down
      WBPaper00041174:environmental
      WBPaper00041174:genotypic
      WBPaper00041174:genotypic_and_environmental
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00045673:colistin_upregulated
      WBPaper00046853:AOBr_M.aeruginosa-batch-culture_upregulated
      WBPaper00048637:lin-35(n745)_starvation_downregulated
      WBPaper00048989:N2_allantoin_upregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00053550:daf-19(m86)_downregulated_3-fold-embryo
      WBPaper00053550:daf-19(m86)_downregulated_L1
      WBPaper00057098:SiO2-nanoparticles_upregulated
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_ET
      [cgc5767]:expression_class_ET_max(53_min)
      [cgc5767]:expression_class_E_pi(53_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_ME
      [cgc5767]:expression_class_MET
      [cgc6390]:Cluster_A
      [cgc6390]:herm_sex-enriched
      [cgc6390]:mixed_oogenesis-somatic
    Interaction: WBInteraction000144629
      WBInteraction000251397
      WBInteraction000255257
      WBInteraction000291241
      WBInteraction000333107
      WBInteraction000334803
      WBInteraction000394732
      WBInteraction000421120
      WBInteraction000429918
      WBInteraction000576725
  Map_info: Positive: Positive_clone: T02G5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 0.493643
  Reference: WBPaper00037843
    WBPaper00038491
    WBPaper00055090
  Method: Gene