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WormBase Tree Display for Gene: WBGene00018907

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Name Class

WBGene00018907SMapS_parentSequenceF55G1
IdentityVersion1
NameSequence_nameF55G1.15
Molecular_nameF55G1.15
F55G1.15.1
CE43679
Other_nameCELE_F55G1.15Accession_evidenceNDBBX284604
Public_nameF55G1.15
DB_infoDatabaseAceViewgene4I264
WormQTLgeneWBGene00018907
WormFluxgeneWBGene00018907
NDBlocus_tagCELE_F55G1.15
NCBIgene186329
RefSeqproteinNM_068808.6
TREEFAMTREEFAM_IDTF319616
TrEMBLUniProtAccQ20854
UniProt_GCRPUniProtAccQ20854
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:00WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (47)
RNASeq_FPKM (74)
GO_annotation00069374
Ortholog (28)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF55G1.15
Corresponding_CDS_historyF55G1.15:wp112
F55G1.15:wp202
F55G1.15:wp208
Corresponding_transcriptF55G1.15.1
Other_sequenceAcan_isotig20826
Associated_featureWBsf651919
WBsf667639
WBsf996993
WBsf1017723
WBsf230281
Experimental_infoRNAi_resultWBRNAi00032896Inferred_automaticallyRNAi_primary
WBRNAi00048539Inferred_automaticallyRNAi_primary
WBRNAi00015745Inferred_automaticallyRNAi_primary
WBRNAi00048538Inferred_automaticallyRNAi_primary
Expr_patternExpr1022947
Expr1152324
Expr2004237
Expr2022460
Drives_constructWBCnstr00026196
Construct_productWBCnstr00026196
Microarray_results (21)
Expression_clusterWBPaper00032425:down_in_zfp-1
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:excretory-cell_larva_enriched
WBPaper00037950:excretory-cell_larva_SelectivelyEnriched
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_larva_SelectivelyEnriched
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:intestine_larva_enriched
WBPaper00037950:intestine_larva_SelectivelyEnriched
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
WBPaper00044260:1-methylnicotinamide_downregulated
WBPaper00044316:HgCl2_7.5uM_upregulated
WBPaper00044578:reduced-humidity_downregulated_microarray
WBPaper00044736:oscillating_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045050:csr-1(hypomorph)_upregulated
WBPaper00045257:bar-1(ga80)_downregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046805:csr-1(RNAi)_upregulated_Set1
WBPaper00048971:daf-16(mgDf50)_upregulated_L1
WBPaper00048988:neuron_expressed
WBPaper00049498:npr-1(ur89)_regulated_5
WBPaper00049635:dop-1(vs100)_upregulated
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00049954:BPS_upregulated
WBPaper00050080:rbr-2(tm3141)_upregulated
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_adult_25C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:intestine_enriched
WBPaper00050990:intestine_expressed
WBPaper00051558:aging_regulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:zidovudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053388:dauer_regulated_Cluster1
WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_doenregulated
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055226:ADR-2_target_adr-1(tm668)
WBPaper00055226:ADR-2_target_N2
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055386:eat-2(ad465)_upregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056161:male_enriched_siRNA
WBPaper00056275:P.aeruginosa_upregulated
WBPaper00056275:P.aeruginosa_upregulated_pmk-1(km25)_dependent
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056809:smn-1(ok355)_downregulated
WBPaper00056826:hmc_biased
WBPaper00057068:Cadmium_upregulated
WBPaper00057068:ints-4(RNAi)_upregulated
WBPaper00057265:metaformin_upregulated_OP50
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058725:sftb-1(cer39)_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00058969:RIS_depleted
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059735:glucose_downregulated_lpin-1(RNAi)
WBPaper00059754:P.aeruginosa_PA14_upregulated
WBPaper00059839:S.maltophilia_regulated
WBPaper00059987:Wounding_downregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060526:plp-1(ok2155)_downregulated
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061274:microgravity_upregulated
WBPaper00061340:ADE
WBPaper00061340:CEPsh
WBPaper00061340:IL1
WBPaper00061341:28C_24h_upregulated
WBPaper00061405:S.aureus_upregulated_starvation
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061527:cdc-42_17192-rab-5_18073
WBPaper00061527:F55G1.15_14159-ncx-6
WBPaper00061530:nhr-49(e2144)_upregulated
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062345:bortezomib_4h_downregulated_N2
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064156:lbp-3(overexpress)_upregulated
WBPaper00064156:lipl-4(overexpress)_upregulated
WBPaper00064637:cox-5B(RNAi)_upregulated
WBPaper00064871:PA14_upregulated_AWA
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00065029:cadmium_upregulated
WBPaper00065086:JU1400_N.ausubeli_regulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_20C
WBPaper00065331:100nM-ivermectin_downregulated
WBPaper00065734:unc-25(e156)_upregulated
WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
WBPaper00065841:13_1
WBPaper00066062:xrep-4(lax137)_upregulated
cgc4489_group_1
cgc4489_group_7
WBPaper00025032:cluster_181
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00029437:dcr-1_downregulated
WBPaper00031252:AIN-1_IP_enriched
WBPaper00034661:AgNPs_downregulated
WBPaper00034739:N2moreDR1350
WBPaper00035227:heat_shock_regulated
WBPaper00036286:Pattern_C
WBPaper00038172:crh-1null_up_regulated
WBPaper00038172:tax-6null_up_regulated
WBPaper00039866:ClassComp_daf-19_downregulated
WBPaper00039866:SAM_daf-19_downregulated
WBPaper00040184:hcf-1down_sir-2.1down_daf-2down
WBPaper00040210:Chlorpyrifos_24C_regulated
WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.5
WBPaper00040876:mir-35_downregulated
WBPaper00040985:AIN-2_L4_intestine
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00044091:Bpseudomallei_repressed_12h
WBPaper00045673:colistin_upregulated
WBPaper00046083:ogt-1(ok1474)_OP50_upregulated
WBPaper00046083:pmk-1(km25)_OP50_upregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00048989:N2_allantoin_downregulated
WBPaper00051448:P.aeruginosa_Slow-Killing_upregulated
WBPaper00053550:daf-19(m86)_downregulated_3-fold-embryo
WBPaper00053550:daf-19(m86)_downregulated_AdultDay2
WBPaper00053688:E.faecalis_upregulated
[cgc6390]:herm_soma-enriched
InteractionWBInteraction000237822
WBInteraction000240244
WBInteraction000323227
WBInteraction000371992
WBInteraction000453882
Map_infoPositivePositive_cloneF55G1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV3.33969
ReferenceWBPaper00065331
MethodGene