WormBase Tree Display for Gene: WBGene00018850

WBGene00018850 SMap: S_parent: Sequence: F55A3
  Identity: Version: 2
    Name: CGC_name: gpx-8 Person_evidence: WBPerson261
      Sequence_name: F55A3.5
      Molecular_name: F55A3.5
      Other_name: CELE_F55A3.5 Accession_evidence: NDB BX284601
      Public_name: gpx-8
    DB_info: Database: AceView gene 1L358
        WormQTL gene WBGene00018850
        WormFlux gene WBGene00018850
        NDB locus_tag CELE_F55A3.5
        NCBI gene 172983
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:00 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 20 Jul 2012 14:20:02 WBPerson2970 Name_change: CGC_name: gpx-8
    Status: Live
  Gene_info: Biotype: SO:0000336
    Gene_class: gpx
    Allele (11)
    RNASeq_FPKM (74)
    GO_annotation: 00095587
      00095588
      00095589
      00095590
    Paralog: WBGene00007516 Caenorhabditis elegans From_analysis: Panther
      WBGene00007517 Caenorhabditis elegans From_analysis: Panther
      WBGene00009165 Caenorhabditis elegans From_analysis: Panther
      WBGene00011045 Caenorhabditis elegans From_analysis: Panther
      WBGene00020373 Caenorhabditis elegans From_analysis: Panther
      WBGene00022377 Caenorhabditis elegans From_analysis: Panther
      WBGene00019846 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Predicted to enable peroxidase activity. Predicted to be involved in cellular oxidant detoxification. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS_history: F55A3.5:wp282
    Corresponding_pseudogene: F55A3.5
  Experimental_info: Expr_pattern: Expr1016967
      Expr1152217
      Expr2012222
      Expr2030458
    Drives_construct: WBCnstr00026241
    Construct_product: WBCnstr00026241
    Microarray_results (14)
    Expression_cluster: WBPaper00029087:4-methylsterol_upregulated
      WBPaper00031040:TGF-beta_adult_upregulated
      WBPaper00036291:ung-1_regulated
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:coelomocytes_CoreEnriched
      WBPaper00037950:coelomocytes_embryo_enriched
      WBPaper00037950:coelomocytes_embryo_SelectivelyEnriched
      WBPaper00037950:coelomocytes_larva_enriched
      WBPaper00037950:coelomocytes_larva_SelectivelyEnriched
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00038168:lin-15B(n744)_upregulated
      WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
      WBPaper00040285:H2S_24hr_upregulated
      WBPaper00042561:smg-2(RNAi)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044760:germline_specific
      WBPaper00045521:Gender_Neutral
      WBPaper00049098:hrde-1(tm1200)-induced_15C
      WBPaper00049098:hrde-1(tm1200)-induced_23C
      WBPaper00049098:hrde-1(tm1200)-induced_p15C
      WBPaper00049377:MWCNT_upregulated
      WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
      WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
      WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00051265:F1_hrde-1(tm1200)_upregulated
      WBPaper00051265:F4_hrde-1(tm1200)_upregulated
      WBPaper00051265:F4_morc-1(tm6048)_upregulated
      WBPaper00052885:hrde-1(tm1200)-emb-4(qm31)_regulated
      WBPaper00053302:alovudine_72h_regulated
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_downregulated_starved-L1_Truseq
      WBPaper00053664:ins-11(tm1053)_downregulated
      WBPaper00053810:clk-1(qm30)_upregulated
      WBPaper00053810:isp-1(qm150)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
      WBPaper00055354:Rifampicin_upregulated
      WBPaper00055941:atfs-1(et15)_upregulated
      WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
      WBPaper00055941:nuo-6(qm200)_upregulated
      WBPaper00056284:ints-5(RNAi)_upregulated
      WBPaper00056290:hsp-6(mg585)_upregulated
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056826:hmc_biased
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00059605:mut-16(pk710)_upregulated
      WBPaper00060273:isp-1(qm150)_downregulated
      WBPaper00060445:ikb-1(nr2027)_upregulated_L4
      WBPaper00060445:nfki-1(cer1)_upregulated_L4
      WBPaper00060526:plp-1(ok2155)_upregulated
      WBPaper00060661:hypoxia_upregulated
      WBPaper00060909:atfs-1(et18)_upregulated
      WBPaper00061340:Coelomocyte
      WBPaper00061340:hmc
      WBPaper00061340:hmc_homolog
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061479:hrde-1(tm1200)_upregulated
      WBPaper00061527:ckr-1-T09B9.3
      WBPaper00061527:srj-21-srh-32
      WBPaper00061530:nhr-49(e2144)_upregulated
      WBPaper00061753:csr-1(tor159)_downregulated_25C
      WBPaper00061995:mter-4(syb3662syb3403)_upregulated
      WBPaper00062056:lin-15B(n744)_upregulated
      WBPaper00062146:MOG-7-degron_2h_regulated
      WBPaper00062156:jmjd-5(zr1234)_downregulated_germline
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
      WBPaper00065096:25C_vs_20C_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
      WBPaper00065096:npr-8(ok1439)_upregulated_Day10_25C
      WBPaper00065734:unc-25(e156)_upregulated
      WBPaper00065841:1_2
      WBPaper00065841:12_0
      WBPaper00065841:23_0
      WBPaper00065841:110_0
      WBPaper00065841:110_1
      WBPaper00065993:glp-1(e2141)_downregulated
      cgc4489_group_2
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00045263:nuo-6(qm200)_upregulated
    Interaction (19)
  Map_info: Map: I Position: 5.13524
    Positive: Positive_clone: F55A3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00045706
    WBPaper00051166
    WBPaper00061220
    WBPaper00064067
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
    [2021-08-05T21:54:38.312Z WBPerson51134] Gene Updated: Changed to coding pseudogene based on RNASeq evidence. Curator_confirmed: WBPerson51134
  Method: Gene