WormBase Tree Display for Gene: WBGene00022377
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| WBGene00022377 | SMap | S_parent | Sequence | Y94H6A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gpx-4 | Person_evidence | WBPerson261 | |||||
| WBPerson1141 | |||||||||
| Sequence_name | Y94H6A.4 | ||||||||
| Molecular_name | Y94H6A.4 | ||||||||
| Y94H6A.4.1 | |||||||||
| CE34620 | |||||||||
| Other_name | Y94H6A.g | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y94H6A.4 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | gpx-4 | ||||||||
| DB_info | Database | AceView | gene | 4D436 | |||||
| WormQTL | gene | WBGene00022377 | |||||||
| WormFlux | gene | WBGene00022377 | |||||||
| NDB | locus_tag | CELE_Y94H6A.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022377|UniProtKB=Q9N2X2 | |||||||
| family | PTHR11592 | ||||||||
| NCBI | gene | 190801 | |||||||
| RefSeq | protein | NM_067841.5 | |||||||
| TrEMBL | UniProtAcc | Q9N2X2 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N2X2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 20 Jul 2012 14:20:02 | WBPerson2970 | Name_change | CGC_name | gpx-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gpx | ||||||||
| Allele (52) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00093371 | ||||||||
| 00093372 | |||||||||
| 00093373 | |||||||||
| 00093374 | |||||||||
| 00093375 | |||||||||
| 00126495 | |||||||||
| 00126496 | |||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00007516 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00007517 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00009165 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00011045 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00018850 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00019846 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00020373 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable glutathione peroxidase activity. Predicted to be involved in cellular oxidant detoxification and response to oxidative stress. Predicted to be located in extracellular space. Human ortholog(s) of this gene implicated in several diseases, including diabetes mellitus (multiple); gastrointestinal system cancer (multiple); and respiratory system cancer (multiple). Is an ortholog of human GPX3 (glutathione peroxidase 3) and GPX5 (glutathione peroxidase 5). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (34) | ||||||||
| Molecular_info | Corresponding_CDS | Y94H6A.4 | |||||||
| Corresponding_CDS_history | Y94H6A.4:wp102 | ||||||||
| Corresponding_transcript | Y94H6A.4.1 | ||||||||
| Other_sequence (15) | |||||||||
| Associated_feature | WBsf995750 | ||||||||
| WBsf1016931 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00058655 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037919 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021814 | ||||||||
| Expr1162077 | |||||||||
| Expr2012218 | |||||||||
| Expr2030454 | |||||||||
| Drives_construct | WBCnstr00019127 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (88) | |||||||||
| Interaction (20) | |||||||||
| Map_info | Map | IV | Position | -6.7608 | |||||
| Positive | Positive_clone | Y94H6A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00042257 | |||||||||
| WBPaper00045706 | |||||||||
| WBPaper00045770 | |||||||||
| WBPaper00053864 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00058783 | |||||||||
| WBPaper00059551 | |||||||||
| WBPaper00061220 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
