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WormBase Tree Display for Gene: WBGene00018210

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Name Class

WBGene00018210SMapS_parentSequenceF39G3
IdentityVersion1
NameSequence_nameF39G3.5
Molecular_nameF39G3.5a
F39G3.5a.1
CE10120
F39G3.5b
CE36933
F39G3.5b.1
F39G3.5b.2
Other_nameCELE_F39G3.5Accession_evidenceNDBBX284605
Public_nameF39G3.5
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:59WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (30)
RNASeq_FPKM (74)
GO_annotation00021959
00021960
00021961
00027624
00123405
Ortholog (32)
ParalogWBGene00010131Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018209Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable oxidoreductase activity. Involved in innate immune response. Predicted to be located in membrane. Is an ortholog of human CYB561 (cytochrome b561) and CYBRD1 (cytochrome b reductase 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelEFO:MONDO:0021272Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:2571)
Molecular_infoCorresponding_CDSF39G3.5a
F39G3.5b
Corresponding_CDS_historyF39G3.5:wp126
Corresponding_transcriptF39G3.5a.1
F39G3.5b.1
F39G3.5b.2
Other_sequenceAcan_isotig12958
Name_isotig06507
Oden_isotig29436
Associated_featureWBsf231686
WBsf231687
Experimental_infoRNAi_resultWBRNAi00046790Inferred_automaticallyRNAi_primary
WBRNAi00033598Inferred_automaticallyRNAi_primary
Expr_patternExpr1026579
Expr1150665
Expr2003507
Expr2021722
Drives_constructWBCnstr00026697
Construct_productWBCnstr00026697
Microarray_results (19)
Expression_clusterWBPaper00032528:L3_enriched
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:dopaminergic-neurons_larva_enriched
WBPaper00037950:dopaminergic-neurons_larva_SelectivelyEnriched
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_CoreEnriched
WBPaper00037950:intestine_embryo_enriched
WBPaper00037950:intestine_embryo_SelectivelyEnriched
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:intestine_larva_enriched
WBPaper00037950:intestine_larva_SelectivelyEnriched
WBPaper00037950:pharyngeal-muscle_embryo_enriched
WBPaper00037950:pharyngeal-muscle_embryo_SelectivelyEnriched
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00037950:PVD-OLL-neurons_larva_enriched
WBPaper00037950:PVD-OLL-neurons_larva_SelectivelyEnriched
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00044037:eat-2_upregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045417:128Q-huntingtin_downreglated
WBPaper00045486:starvation_downregulated
WBPaper00045861:set-2(ok952)_upregulated
WBPaper00046121:endoderm_unique
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00048923:Aging_regulated
WBPaper00049018:swsn-2.2(RNAi)_downregulated
WBPaper00049498:npr-1(ur89)_regulated_5
WBPaper00049635:dop-1(vs100)_upregulated
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050096:P.aeruginosa_upregulated
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:daf-2(e1370)_vs_daf-2(e1370);mir-34(gk437)_regulated_dauer_25C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00051039:intestine_enriched
WBPaper00051404:alg-1(gk214)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053388:dauer_regulated_Cluster4
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056161:hermaphrodite_enriched_siRNA
WBPaper00056167:Cry5B_downregulated
WBPaper00056284:ints-5(RNAi)_upregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056586:kri-1(ok1251)_upregulated
WBPaper00056826:hmc_biased
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057006:DietaryRestriction_downregulated
WBPaper00057288:Cold_upregulated_transcript
WBPaper00057347:nhr-14(tm1473)_upreglated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058711:paraquat_downregulated
WBPaper00058948:PA14_downregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00059839:S.maltophilia_regulated
WBPaper00059895:wounding_upregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
WBPaper00061007:HB101_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061081:E.faecalis_upregulated_skpo-1(ok1640)
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061274:hypergravity_15xg_downregulated
WBPaper00061340:Intestine
WBPaper00061527:F54D5.3_7003-F54D5.3_7004
WBPaper00061530:nhr-49(e2144)_upregulated
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062184:PA14_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062669:extracellular-vesicle_protein
WBPaper00062684:pathogen_upregulated_CB4856
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064716:paraquat_downregulated
WBPaper00064871:PA14_upregulated_AWA
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00065086:N2_N.ausubeli_regulated
WBPaper00065734:unc-25(e156)_upregulated
WBPaper00065749:Heat-Shock-With-Recovery_upregulated_N2
WBPaper00065749:Heat-Shock_downregulated_N2
WBPaper00065841:3_4
WBPaper00065841:30_4
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
WBPaper00066232:hsf-1(RNAi)_upregulated_WT
cgc4386_cluster_4_5
cgc4489_group_5
cgc4489_group_13
WBPaper00024671:AFD_AWB_vs_unsorted_downregulated
WBPaper00025032:cluster_75
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00028482:PA14_upregulated
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031252:AIN-2_IP_enriched
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00032062:age_regulated_genes
WBPaper00032165:differentially_expressed_with_age_medoid_2
WBPaper00034661:AgNPs_downregulated
WBPaper00034757:down_by_oxidative_stress
WBPaper00035084:L1_enriched_AIN-2_IP
WBPaper00035084:L2_enriched_AIN-2_IP
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035873:osm-8_regulated
WBPaper00036286:Pattern_G
WBPaper00036383:ash-2_Day8_regulated
WBPaper00038172:tax-6null_up_regulated
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00040184:hcf-1down_sir-2.1nc_daf-2nc
WBPaper00040426:CYD-1_CDK-4_downregulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_old
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00040963:TA300_up
WBPaper00040985:AIN-2_asynchronous_intestine
WBPaper00040985:AIN-2_L4_intestine
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041174:environmental
WBPaper00041174:genotypic
WBPaper00041174:genotypic_and_environmental
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041939:control_vs_EtBr-exposed_24h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00042574:JU1580_OrsayVirus_upregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00045673:colistin_upregulated
WBPaper00047070:xpa-1_UV_downregulated
WBPaper00048637:lin-35(n745)_starvation_upregulated
WBPaper00048989:N2_rapamycin_upregulated
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(143_min)
[cgc5767]:expression_class_SE
[cgc5767]:expression_class_SE_pi(143_min)
[cgc6390]:Cluster_A
InteractionWBInteraction000031012
WBInteraction000340606
WBInteraction000427850
WBInteraction000514562
Map_infoPositivePositive_cloneF39G3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV-4.53181
ReferenceWBPaper00038491
WBPaper00055090
MethodGene