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WormBase Tree Display for Gene: WBGene00017982

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Name Class

WBGene00017982SMapS_parentSequenceF32D1
IdentityVersion2
NameCGC_namehpo-18Paper_evidenceWBPaper00038231
Person_evidenceWBPerson26
Sequence_nameF32D1.2
Molecular_nameF32D1.2
F32D1.2.1
CE09866
Other_nameCELE_F32D1.2Accession_evidenceNDBBX284605
Public_namehpo-18
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:59WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
226 Apr 2011 13:31:47WBPerson2970Name_changeCGC_namehpo-18
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhpo
Allele (18)
StrainWBStrain00037472
RNASeq_FPKM (74)
GO_annotation00027726
00027727
00027728
00123253
00123254
00123255
Contained_in_operonCEOP5052
Ortholog (18)
ParalogWBGene00019880Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00022582Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to contribute to proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in proton motive force-driven mitochondrial ATP synthesis. Predicted to be located in mitochondrial inner membrane. Predicted to be part of mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1). Human ortholog(s) of this gene implicated in mitochondrial complex V (ATP synthase) deficiency nuclear type 3. Is an ortholog of human ATP5F1E (ATP synthase F1 subunit epsilon) and ATP5F1EP2 (ATP synthase F1 subunit epsilon pseudogene 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0060332Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:838)
Molecular_infoCorresponding_CDSF32D1.2
Corresponding_transcriptF32D1.2.1
Other_sequence (21)
Associated_featureWBsf652566
WBsf233569
Experimental_infoRNAi_result (23)
Expr_patternExpr1013457
Expr1037738
Expr1150007
Expr2012560
Expr2030797
Drives_constructWBCnstr00026867
Construct_productWBCnstr00026867
Microarray_results (20)
Expression_clusterWBPaper00032528:L3_enriched
WBPaper00033065:isp-1-1(qm150)_upregulated
WBPaper00037086:biotin_regulated
WBPaper00038168:lin-15B(n744)_downregulated
WBPaper00038289:oocyte_protein
WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_downregulated_RNAseq
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_downregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
WBPaper00040209:B.thuringiensis_downregulated_MY18
WBPaper00040965:lipid-droplet_associated_protein
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044736:flat_dev_expression
WBPaper00045316:prg-1_downregulated_L2
WBPaper00045521:Gender_Neutral
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00046509:lin-35(n745)_downregulated
WBPaper00048785:heat-shock_upregulated
WBPaper00048988:neuron_expressed
WBPaper00049018:swsn-2.2(RNAi)_upregulated
WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050344:AFD-neuron_enriched
WBPaper00050344:ASER-neuron_enriched
WBPaper00050344:PLM-neuron_enriched
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050698:DEP-1_interacting
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00050990:seam_expressed
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051558:aging_regulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053289:DREAM-target
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_downregulated_L1_SMARTseq
WBPaper00053388:dauer_regulated_Cluster6
WBPaper00053599:oocyte_vs_mitosis_upregulated
WBPaper00053713:Pheromone-induced_postdauer_vs_control_downregulated
WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
WBPaper00053814:OP50_vs_PY79_downregulated_PY79
WBPaper00055049:S.gordonii_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055482:pmt-2(RNAi)_downregulated
WBPaper00055648:germline_expressed
WBPaper00055969:electromagnetic-field_upregulated
WBPaper00056039:ptrn-1(tm5597)_upregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_downregulated_N2
WBPaper00056139:soil-microbiota_downregulated
WBPaper00056161:male_enriched_siRNA
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056997:nmad-1(ok3133)_downregulated_germline_25C
WBPaper00057041:unc-70(cas983)_upregulated
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00059328:mrps-5(RNAi)_downregulated_protein
WBPaper00059605:MUT-16_interacting
WBPaper00059763:neuron_expressed
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060661:sensory-neuron_enriched
WBPaper00060703:nas-38(ok3407)_downregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061341:28C_48h_downregulated
WBPaper00061377:MYRF-1_interacting
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061527:C18E9.4-T27E9.2
WBPaper00061818:ELKS-1_interacting
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062498:PPM-1.D_interacting
WBPaper00062554:MAGU-2_interacting
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064716:paraquat_downregulated
WBPaper00064992:Eugenol_downregulated
WBPaper00065120:body-muscle-transcriptome
cgc4386_cluster_1_4
cgc4489_group_22
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00032062:age_regulated_genes
WBPaper00038231:Cry5B_1.5-fold_downregulated
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00053236:daf-16(mgDF50)_regulated_Starved
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
[cgc5767]:expression_class_M
[cgc5767]:expression_class_MD
[cgc5767]:expression_class_MD_pd(23_min)
[cgc5767]:expression_class_SM
[cgc5767]:expression_class_SMD
Interaction (35)
Map_infoMapVPosition-5.88245Error0.011872
PositivePositive_cloneF32D1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00028999
WBPaper00038491
WBPaper00055090
WBPaper00060452
WBPaper00061870
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene