WormBase Tree Display for Gene: WBGene00019880
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| WBGene00019880 | SMap | S_parent | Sequence | R05D3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R05D3.6 | |||||||
| Molecular_name | R05D3.6 | ||||||||
| R05D3.6.1 | |||||||||
| CE00285 | |||||||||
| Other_name | CELE_R05D3.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | R05D3.6 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (17) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Contained_in_operon | CEOP3512 | ||||||||
| Ortholog (16) | |||||||||
| Paralog | WBGene00017982 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00022582 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | R05D3.6 encodes the epsilon subunit of the soluble, catalytic F1 portion of ATP synthase (mitochondrial respiratory chain [MRC] complex V); RNAi experiments indicate that loss of R05D3.6 activity has minor effects on growth rate. | Paper_evidence | WBPaper00024944 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Jan 2007 00:00:00 | ||||||||
| Automated_description | Predicted to contribute to proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in proton motive force-driven mitochondrial ATP synthesis. Located in mitochondrion. Human ortholog(s) of this gene implicated in mitochondrial complex V (ATP synthase) deficiency nuclear type 3. Is an ortholog of human ATP5F1E (ATP synthase F1 subunit epsilon) and ATP5F1EP2 (ATP synthase F1 subunit epsilon pseudogene 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0060332 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:838) | ||||
| Molecular_info | Corresponding_CDS | R05D3.6 | |||||||
| Corresponding_transcript | R05D3.6.1 | ||||||||
| Other_sequence (18) | |||||||||
| Associated_feature | WBsf993321 | ||||||||
| WBsf227119 | |||||||||
| WBsf227120 | |||||||||
| WBsf227121 | |||||||||
| Experimental_info | RNAi_result (17) | ||||||||
| Expr_pattern | Expr1021199 | ||||||||
| Expr1154982 | |||||||||
| Drives_construct | WBCnstr00025526 | ||||||||
| Construct_product | WBCnstr00025526 | ||||||||
| Microarray_results | SMD_R05D3.6 | ||||||||
| 190806_s_at | |||||||||
| Expression_cluster (71) | |||||||||
| Interaction | WBInteraction000151270 | ||||||||
| WBInteraction000536370 | |||||||||
| WBInteraction000536383 | |||||||||
| WBInteraction000536397 | |||||||||
| WBInteraction000539719 | |||||||||
| WBInteraction000548168 | |||||||||
| WBInteraction000551840 | |||||||||
| Map_info | Positive | Positive_clone | R05D3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -0.32556 | |||||||
| Reference | WBPaper00024944 | ||||||||
| Method | Gene |
