WormBase Tree Display for Gene: WBGene00017982
expand all nodes | collapse all nodes | view schema
| WBGene00017982 | SMap | S_parent | Sequence | F32D1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | hpo-18 | Paper_evidence | WBPaper00038231 | |||||
| Person_evidence | WBPerson26 | ||||||||
| Sequence_name | F32D1.2 | ||||||||
| Molecular_name | F32D1.2 | ||||||||
| F32D1.2.1 | |||||||||
| CE09866 | |||||||||
| Other_name | CELE_F32D1.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | hpo-18 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 26 Apr 2011 13:31:47 | WBPerson2970 | Name_change | CGC_name | hpo-18 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hpo | ||||||||
| Allele (18) | |||||||||
| Strain | WBStrain00037472 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00027726 | ||||||||
| 00027727 | |||||||||
| 00027728 | |||||||||
| 00123253 | |||||||||
| 00123254 | |||||||||
| 00123255 | |||||||||
| Contained_in_operon | CEOP5052 | ||||||||
| Ortholog (18) | |||||||||
| Paralog | WBGene00019880 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00022582 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to contribute to proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in proton motive force-driven mitochondrial ATP synthesis. Predicted to be located in mitochondrial inner membrane. Predicted to be part of mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1). Human ortholog(s) of this gene implicated in mitochondrial complex V (ATP synthase) deficiency nuclear type 3. Is an ortholog of human ATP5F1E (ATP synthase F1 subunit epsilon) and ATP5F1EP2 (ATP synthase F1 subunit epsilon pseudogene 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0060332 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:838) | ||||
| Molecular_info | Corresponding_CDS | F32D1.2 | |||||||
| Corresponding_transcript | F32D1.2.1 | ||||||||
| Other_sequence (21) | |||||||||
| Associated_feature | WBsf652566 | ||||||||
| WBsf233569 | |||||||||
| Experimental_info | RNAi_result (23) | ||||||||
| Expr_pattern | Expr1013457 | ||||||||
| Expr1037738 | |||||||||
| Expr1150007 | |||||||||
| Expr2012560 | |||||||||
| Expr2030797 | |||||||||
| Drives_construct | WBCnstr00026867 | ||||||||
| Construct_product | WBCnstr00026867 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (115) | |||||||||
| Interaction (35) | |||||||||
| Map_info | Map | V | Position | -5.88245 | Error | 0.011872 | |||
| Positive | Positive_clone | F32D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028999 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060452 | |||||||||
| WBPaper00061870 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
