WormBase Tree Display for Gene: WBGene00017982
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WBGene00017982 | SMap | S_parent | Sequence | F32D1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | hpo-18 | Paper_evidence | WBPaper00038231 | |||||
Person_evidence | WBPerson26 | ||||||||
Sequence_name | F32D1.2 | ||||||||
Molecular_name | F32D1.2 | ||||||||
F32D1.2.1 | |||||||||
CE09866 | |||||||||
Other_name | CELE_F32D1.2 | Accession_evidence | NDB | BX284605 | |||||
Public_name | hpo-18 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 26 Apr 2011 13:31:47 | WBPerson2970 | Name_change | CGC_name | hpo-18 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | hpo | ||||||||
Allele (18) | |||||||||
Strain | WBStrain00037472 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00027726 | ||||||||
00027727 | |||||||||
00027728 | |||||||||
00123253 | |||||||||
00123254 | |||||||||
00123255 | |||||||||
Contained_in_operon | CEOP5052 | ||||||||
Ortholog (18) | |||||||||
Paralog | WBGene00019880 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00022582 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to contribute to proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in proton motive force-driven mitochondrial ATP synthesis. Predicted to be located in mitochondrial inner membrane. Predicted to be part of mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1). Human ortholog(s) of this gene implicated in mitochondrial complex V (ATP synthase) deficiency nuclear type 3. Is an ortholog of human ATP5F1E (ATP synthase F1 subunit epsilon) and ATP5F1EP2 (ATP synthase F1 subunit epsilon pseudogene 2). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0060332 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:838) | ||||
Molecular_info | Corresponding_CDS | F32D1.2 | |||||||
Corresponding_transcript | F32D1.2.1 | ||||||||
Other_sequence (21) | |||||||||
Associated_feature | WBsf652566 | ||||||||
WBsf233569 | |||||||||
Experimental_info | RNAi_result (23) | ||||||||
Expr_pattern | Expr1013457 | ||||||||
Expr1037738 | |||||||||
Expr1150007 | |||||||||
Expr2012560 | |||||||||
Expr2030797 | |||||||||
Drives_construct | WBCnstr00026867 | ||||||||
Construct_product | WBCnstr00026867 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (115) | |||||||||
Interaction | WBInteraction000008398 | ||||||||
WBInteraction000008399 | |||||||||
WBInteraction000008400 | |||||||||
WBInteraction000008401 | |||||||||
WBInteraction000037062 | |||||||||
WBInteraction000151571 | |||||||||
WBInteraction000208867 | |||||||||
WBInteraction000212163 | |||||||||
WBInteraction000251315 | |||||||||
WBInteraction000257530 | |||||||||
WBInteraction000280434 | |||||||||
WBInteraction000283332 | |||||||||
WBInteraction000306256 | |||||||||
WBInteraction000308733 | |||||||||
WBInteraction000311583 | |||||||||
WBInteraction000330143 | |||||||||
WBInteraction000331927 | |||||||||
WBInteraction000348582 | |||||||||
WBInteraction000387085 | |||||||||
WBInteraction000391749 | |||||||||
WBInteraction000416305 | |||||||||
WBInteraction000431730 | |||||||||
WBInteraction000536368 | |||||||||
WBInteraction000536381 | |||||||||
WBInteraction000536395 | |||||||||
WBInteraction000537148 | |||||||||
WBInteraction000539676 | |||||||||
WBInteraction000554006 | |||||||||
WBInteraction000566397 | |||||||||
WBInteraction000566676 | |||||||||
WBInteraction000569370 | |||||||||
WBInteraction000572238 | |||||||||
WBInteraction000578094 | |||||||||
WBInteraction000578539 | |||||||||
WBInteraction000583433 | |||||||||
Map_info | Map | V | Position | -5.88245 | Error | 0.011872 | |||
Positive | Positive_clone | F32D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00028999 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00060452 | |||||||||
WBPaper00061870 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |