WormBase Tree Display for Gene: WBGene00017755
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WBGene00017755 | SMap | S_parent | Sequence | F23F12 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | zip-8 | Person_evidence | WBPerson260 | |||
WBPerson460 | |||||||
Sequence_name | F23F12.9 | ||||||
Molecular_name | F23F12.9a | ||||||
F23F12.9a.1 | |||||||
CE01256 | |||||||
F23F12.9b | |||||||
CE32389 | |||||||
F23F12.9b.1 | |||||||
Other_name | CELE_F23F12.9 | Accession_evidence | NDB | BX284603 | |||
Public_name | zip-8 | ||||||
DB_info | Database | AceView | gene | 3H569 | |||
WormQTL | gene | WBGene00017755 | |||||
WormFlux | gene | WBGene00017755 | |||||
NDB | locus_tag | CELE_F23F12.9 | |||||
Panther | gene | CAEEL|WormBase=WBGene00017755|UniProtKB=P46505 | |||||
family | PTHR23334 | ||||||
NCBI | gene | 175924 | |||||
RefSeq | protein | NM_066025.5 | |||||
NM_181936.7 | |||||||
SwissProt | UniProtAcc | P46505 | |||||
UniProt_GCRP | UniProtAcc | P46505 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | zip | ||||||
Allele (37) | |||||||
Strain | WBStrain00002144 | ||||||
WBStrain00030131 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00046256 | ||||||
00046257 | |||||||
00046258 | |||||||
00046259 | |||||||
00046260 | |||||||
00046261 | |||||||
00123062 | |||||||
00123063 | |||||||
00123064 | |||||||
Ortholog (21) | |||||||
Paralog | WBGene00016754 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00016997 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00021552 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00019327 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description | Concise_description | zip-8 encodes a bZip family transcription factor; the tm721 variation that affects zip-8 has been reported to result in lethality; a zip-8::gfp reporter fusion is expressed in the adult intestine. | Paper_evidence | WBPaper00027309 | |||
WBPaper00031006 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 20 Feb 2014 00:00:00 | ||||||
Automated_description | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Expressed in intestinal cell. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info (5) | |||||||
Experimental_info | RNAi_result | WBRNAi00031333 | Inferred_automatically | RNAi_primary | |||
WBRNAi00068787 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00045438 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00013827 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00005895 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern (11) | |||||||
Drives_construct | WBCnstr00002903 | ||||||
WBCnstr00015247 | |||||||
WBCnstr00022349 | |||||||
WBCnstr00027047 | |||||||
Construct_product | WBCnstr00016740 | ||||||
WBCnstr00022349 | |||||||
WBCnstr00027047 | |||||||
Microarray_results (29) | |||||||
Expression_cluster (238) | |||||||
Interaction (182) | |||||||
Map_info | Map | III | Position | -1.1954 | Error | 0.002656 | |
Positive | Positive_clone | F23F12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00028945 | ||||||
WBPaper00058798 | |||||||
WBPaper00061738 | |||||||
WBPaper00061938 | |||||||
WBPaper00062117 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |