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WormBase Tree Display for Gene: WBGene00017675

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Name Class

WBGene00017675SMapS_parentSequenceF21F3
IdentityVersion1
NameSequence_nameF21F3.6
Molecular_nameF21F3.6
F21F3.6.1
CE09536
Other_nameCELE_F21F3.6Accession_evidenceNDBBX284601
Public_nameF21F3.6
DB_infoDatabaseAceViewgene1F480
WormQTLgeneWBGene00017675
WormFluxgeneWBGene00017675
NDBlocus_tagCELE_F21F3.6
PanthergeneCAEEL|WormBase=WBGene00017675|UniProtKB=P91269
familyPTHR12479
NCBIgene172109
RefSeqproteinNM_059075.9
TREEFAMTREEFAM_IDTF315596
TrEMBLUniProtAccP91269
UniProt_GCRPUniProtAccP91269
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:59WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (30)
RNASeq_FPKM (74)
GO_annotation00050421
00050422
Ortholog (31)
ParalogWBGene00015494Caenorhabditis elegansFrom_analysisPanther
WBGene00016262Caenorhabditis elegansFrom_analysisPanther
WBGene00016533Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionPredicted to be located in lysosomal membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF21F3.6
Corresponding_transcriptF21F3.6.1
Other_sequence (23)
Associated_feature (11)
Experimental_infoRNAi_resultWBRNAi00045222Inferred_automaticallyRNAi_primary
WBRNAi00003420Inferred_automaticallyRNAi_primary
WBRNAi00031231Inferred_automaticallyRNAi_primary
Expr_patternExpr1015014
Expr1037585
Expr1149154
Expr2002835
Expr2021052
Drives_constructWBCnstr00027110
Construct_productWBCnstr00027110
Microarray_results (21)
Expression_clusterWBPaper00032097:CGH-1-associated-mRNA
WBPaper00032528:L3_enriched
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00033065:isp-1-1(qm150)_upregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037055:DAF-16_binding_DNA
WBPaper00037946:MAB-5_interacting
WBPaper00038118:aak-2(gt33)_upregulated
WBPaper00040221:DAF-12_target_ALF4
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_downregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Gender_Neutral
WBPaper00045774:clk-1_upregulated
WBPaper00048762:FOG-3_associated
WBPaper00048988:neuron_expressed
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00050468:hlh-30-dependent_Cry5B_regulated
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:germline_enriched
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053321:PGCs_enriched_NuGen
WBPaper00053388:dauer_regulated_Cluster4
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055049:S.gordonii_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055648:germline_expressed
WBPaper00056284:ints-1(RNAi)_upregulated
WBPaper00056826:SGP_biased
WBPaper00057254:MWCNT_downregulated_mRNA
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00058691:cfp-1(tm6369)_upregulated
WBPaper00058691:sin-3(tm1276)_upregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059471:EGL-43_interacting
WBPaper00059763:neuron_expressed
WBPaper00059895:wounding_upregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060100:SiNP_upregulated_mRNA
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061203:spr-1(ok2144)_downregulated
WBPaper00061340:AIN
WBPaper00061340:RME
WBPaper00061527:cdc-42_17192-rab-5_18073
WBPaper00061527:hrdl-1_3731-lst-4_2238
WBPaper00061651:ASER_enriched
WBPaper00061651:ASJ_enriched
WBPaper00061651:I5_enriched
WBPaper00061651:SDQ_enriched
WBPaper00061651:SMB_enriched
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00062520:qui-1(db104)_upregulated
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00065120:body-muscle-transcriptome
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065975:P-body_vs_oocyte_enriched
WBPaper00065975:P-body_vs_WholeAnimal_enriched
cgc4489_group_12
WBPaper00025032:cluster_3
WBPaper00025032:cluster_11
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00030839:Larval_A_Class
WBPaper00030839:Larval_Pan_Neuronal
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00031532:Larva_Pan_Neuronal_Enriched
WBPaper00035905:FBF-1_Associated
WBPaper00036123:Atrazine_regulated
WBPaper00036286:Pattern_F
WBPaper00037611:RNP-8-associated
WBPaper00037695:CC_3-day
WBPaper00037901:GLD-1_mRNA_targets
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_developing
WBPaper00041370:spg-7(RNAi)_upregulated
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00047070:N2_starvation_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00048989:N2_allantoin_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
[cgc5767]:cluster_3
[cgc5767]:expression_class_E
[cgc5767]:expression_class_ET
[cgc5767]:expression_class_ET_max(41_min)
[cgc5767]:expression_class_E_pi(23_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_ME
[cgc5767]:expression_class_MET
[cgc6390]:male_soma-enriched
Interaction (18)
Map_infoPositivePositive_cloneF21F3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI-0.609921
MethodGene