WormBase Tree Display for Gene: WBGene00016533
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| WBGene00016533 | SMap | S_parent | Sequence | C39D10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | latd-1 | Person_evidence | WBPerson260 | |||||
| Laboratory_evidence | OH | ||||||||
| Sequence_name | C39D10.6 | ||||||||
| Molecular_name | C39D10.6 | ||||||||
| C39D10.6.1 | |||||||||
| CE35425 | |||||||||
| Other_name | C39D10.6 | ||||||||
| CELE_C39D10.6 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | latd-1 | ||||||||
| DB_info | Database | AceView | gene | XI514 | |||||
| WormQTL | gene | WBGene00016533 | |||||||
| WormFlux | gene | WBGene00016533 | |||||||
| NDB | locus_tag | CELE_C39D10.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016533|UniProtKB=Q18527 | |||||||
| family | PTHR12479 | ||||||||
| NCBI | gene | 183338 | |||||||
| RefSeq | protein | NM_076931.4 | |||||||
| TREEFAM | TREEFAM_ID | TF318498 | |||||||
| TrEMBL | UniProtAcc | Q18527 | |||||||
| UniProt_GCRP | UniProtAcc | Q18527 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 29 Sep 2022 22:37:19 | WBPerson21950 | Name_change | CGC_name | latd-1 | ||||
| Other_name | C39D10.6 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | latd | ||||||||
| Allele (28) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00061525 | ||||||||
| 00061526 | |||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00007338 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00008926 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00015494 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00016262 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00045387 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00017675 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to be located in lysosomal membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C39D10.6 | |||||||
| Corresponding_CDS_history | C39D10.6:wp107 | ||||||||
| Corresponding_transcript | C39D10.6.1 | ||||||||
| Other_sequence | FE912799.1 | ||||||||
| Oden_isotig21329 | |||||||||
| ACC11496_1 | |||||||||
| Acan_isotig06483 | |||||||||
| ASC04903_1 | |||||||||
| Acan_isotig06482 | |||||||||
| EX567244.1 | |||||||||
| Associated_feature | WBsf654172 | ||||||||
| WBsf670784 | |||||||||
| WBsf237624 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042206 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029681 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011778 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010294 | ||||||||
| Expr1037088 | |||||||||
| Expr1146198 | |||||||||
| Expr2001535 | |||||||||
| Expr2019756 | |||||||||
| Drives_construct | WBCnstr00027994 | ||||||||
| Construct_product | WBCnstr00027994 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (88) | |||||||||
| Map_info | Positive | Positive_clone | C39D10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -1.01082 | |||||||
| Method | Gene |
