WormBase Tree Display for Gene: WBGene00016533

WBGene00016533 SMap: S_parent: Sequence: C39D10
  Identity: Version: 2
    Name: CGC_name: latd-1 Person_evidence: WBPerson260
          Laboratory_evidence: OH
      Sequence_name: C39D10.6
      Molecular_name: C39D10.6
        C39D10.6.1
        CE35425
      Other_name: C39D10.6
        CELE_C39D10.6 Accession_evidence: NDB BX284606
      Public_name: latd-1
    DB_info: Database: AceView gene XI514
        WormQTL gene WBGene00016533
        WormFlux gene WBGene00016533
        NDB locus_tag CELE_C39D10.6
        Panther gene CAEEL|WormBase=WBGene00016533|UniProtKB=Q18527
          family PTHR12479
        NCBI gene 183338
        RefSeq protein NM_076931.4
        TREEFAM TREEFAM_ID TF318498
        TrEMBL UniProtAcc Q18527
        UniProt_GCRP UniProtAcc Q18527
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 29 Sep 2022 22:37:19 WBPerson21950 Name_change: CGC_name: latd-1
                Other_name: C39D10.6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: latd
    Allele (28)
    RNASeq_FPKM (74)
    GO_annotation: 00061525
      00061526
    Ortholog: WBGene00036671 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00051237 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00141117 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00123952 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
      WBGene00089652 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
      WBGene00222930 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g2382 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g10558 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g10864 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g17631 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP31.g21356 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g4053 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13235 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g5736 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g8282 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00608.g12736 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-C39D10.6 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g18916 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_03255.g29573 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_00071 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_024867 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01462 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g12494 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0212700 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g19484 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00240049 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00258349 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog: WBGene00007338 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00008926 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00015494 Caenorhabditis elegans From_analysis: Panther
      WBGene00016262 Caenorhabditis elegans From_analysis: Panther
      WBGene00045387 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00017675 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Predicted to be located in lysosomal membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C39D10.6
    Corresponding_CDS_history: C39D10.6:wp107
    Corresponding_transcript: C39D10.6.1
    Other_sequence: FE912799.1
      Oden_isotig21329
      ACC11496_1
      Acan_isotig06483
      ASC04903_1
      Acan_isotig06482
      EX567244.1
    Associated_feature: WBsf654172
      WBsf670784
      WBsf237624
  Experimental_info: RNAi_result: WBRNAi00042206 Inferred_automatically: RNAi_primary
      WBRNAi00029681 Inferred_automatically: RNAi_primary
      WBRNAi00011778 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1010294
      Expr1037088
      Expr1146198
      Expr2001535
      Expr2019756
    Drives_construct: WBCnstr00027994
    Construct_product: WBCnstr00027994
    Microarray_results (18)
    Expression_cluster (88)
  Map_info: Positive: Positive_clone: C39D10 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X -1.01082
  Method: Gene