WormBase Tree Display for Gene: WBGene00016973
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WBGene00016973 | SMap | S_parent | Sequence | C56E6 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | abch | ||||||
Allele (30) | |||||||
Strain | WBStrain00001141 | ||||||
WBStrain00032338 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00062741 | ||||||
00062742 | |||||||
00062743 | |||||||
00062744 | |||||||
00062745 | |||||||
00062746 | |||||||
00122473 | |||||||
00122474 | |||||||
Ortholog (27) | |||||||
Paralog | WBGene00006522 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00007060 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00007513 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00007631 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00008950 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00012925 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00015479 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00021535 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00017179 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to enable ATPase-coupled transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in plasma membrane. Predicted to be part of ATP-binding activity cassette (ABC) transporter complex. Expressed in head. Human ortholog(s) of this gene implicated in arteriosclerosis and sitosterolemia. Is an ortholog of human ABCG5 (ATP binding cassette subfamily G member 5). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:2349 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:13886) | ||
DOID:0090019 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:13886) | ||||
Molecular_info | Corresponding_CDS | C56E6.5 | |||||
Corresponding_transcript | C56E6.5.1 | ||||||
Associated_feature | WBsf650157 | ||||||
WBsf988196 | |||||||
WBsf223194 | |||||||
Experimental_info | RNAi_result | WBRNAi00043280 | Inferred_automatically | RNAi_primary | |||
WBRNAi00030207 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012467 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr5598 | ||||||
Expr1024117 | |||||||
Expr1147258 | |||||||
Expr2009077 | |||||||
Expr2027313 | |||||||
Drives_construct | WBCnstr00002037 | ||||||
WBCnstr00027666 | |||||||
Construct_product | WBCnstr00027666 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (102) | |||||||
Map_info | Map | II | Position | -0.1882 | Error | 0.003693 | |
Positive | Positive_clone | C56E6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00015815 | ||||||
WBPaper00031484 | |||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |