WormBase Tree Display for Gene: WBGene00016945

WBGene00016945 SMap: S_parent: Sequence: C55B7
  Identity: Version: 2
    Name: CGC_name: sulp-1 Person_evidence: WBPerson2233
      Sequence_name: C55B7.6
      Molecular_name: C55B7.6a
        C55B7.6a.1
        CE38591
        C55B7.6b
        CE52642
        C55B7.6b.1
      Other_name: CELE_C55B7.6 Accession_evidence: NDB BX284601
      Public_name: sulp-1
    DB_info: Database: AceView gene 1H59
        WormQTL gene WBGene00016945
        WormFlux gene WBGene00016945
        NDB locus_tag CELE_C55B7.6
        Panther gene CAEEL|WormBase=WBGene00016945|UniProtKB=G5EED0
          family PTHR11814
        NCBI gene 183842
        RefSeq protein NM_059465.5
            NM_001361754.3
        TrEMBL UniProtAcc G5EED0
            A0A2K5ATL0
        UniProt_GCRP UniProtAcc G5EED0
        OMIM gene 126650
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 19 Jan 2005 16:30:54 WBPerson2970 Name_change: CGC_name: sulp-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sulp
    Allele (45)
    Strain: WBStrain00032125
      WBStrain00032134
    RNASeq_FPKM (74)
    GO_annotation (17)
    Ortholog (80)
    Paralog: WBGene00010788 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00010789 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00012259 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00013963 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00018283 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00020914 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00017464 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Concise_description: sulp-1 encodes one of eight C. elegans members of the sulfate permease family of anion transporters; by homology, SULP-1 is predicted to function as an anion transporter that regulates cellular pH and volume via transmembrane movement of electrolytes and fluids; a sulp-1::GFP transcriptional fusion is expressed strongly in several neurons, weakly in hypodermal cells and the intestine, and very faintly in the excretory cell and body wall muscle. Paper_evidence: WBPaper00025075
          Curator_confirmed: WBPerson1843
          Date_last_updated: 13 Sep 2006 00:00:00
      Automated_description: Predicted to enable salt transmembrane transporter activity. Predicted to be involved in inorganic anion transmembrane transport and organic anion transport. Predicted to be located in membrane. Expressed in body wall musculature; excretory cell; hypodermis; intestine; and neurons. Human ortholog(s) of this gene implicated in congenital secretory chloride diarrhea 1. Is an ortholog of human SLC26A3 (solute carrier family 26 member 3). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0060296 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3018)
      DOID:13250 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3018)
  Molecular_info: Corresponding_CDS: C55B7.6a
      C55B7.6b
    Corresponding_CDS_history: C55B7.6:wp143
    Corresponding_transcript: C55B7.6a.1
      C55B7.6b.1
    Other_sequence: CJC00607_1
    Associated_feature: WBsf217833
  Experimental_info: RNAi_result: WBRNAi00043230 Inferred_automatically: RNAi_primary
      WBRNAi00043232 Inferred_automatically: RNAi_primary
      WBRNAi00003243 Inferred_automatically: RNAi_primary
      WBRNAi00082630 Inferred_automatically: RNAi_primary
      WBRNAi00082531 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr3246
      Expr1023446
      Expr1037271
      Expr1147211
      Expr2017112
      Expr2035248
    Drives_construct: WBCnstr00011249
    Microarray_results (20)
    Expression_cluster (91)
  Map_info: Map: I Position: 1.15122 Error: 0.003347
    Positive: Positive_clone: C55B7 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5614
    Pseudo_map_position
  Reference: WBPaper00025075
    WBPaper00035539
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene