WormBase Tree Display for Gene: WBGene00016419
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WBGene00016419 | SMap | S_parent | Sequence | C34G6 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | tyr-4 | Person_evidence | WBPerson69 | |||
Sequence_name | C34G6.2 | ||||||
Molecular_name | C34G6.2 | ||||||
C34G6.2.1 | |||||||
CE08574 | |||||||
Other_name | CELE_C34G6.2 | Accession_evidence | NDB | BX284601 | |||
Public_name | tyr-4 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | tyr | ||||||
Allele (44) | |||||||
Strain | WBStrain00031924 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00024775 | ||||||
00122059 | |||||||
Ortholog (46) | |||||||
Paralog | WBGene00009001 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00010060 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00010661 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00015332 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00021553 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00022231 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00017483 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description | Automated_description | Predicted to enable oxidoreductase activity. Human ortholog(s) of this gene implicated in several diseases, including ocular albinism 1; oculocutaneous albinism (multiple); and vitiligo. Is an ortholog of human DCT (dopachrome tautomerase); TYR (tyrosinase); and TYRP1 (tyrosinase related protein 1). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0050633 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||
DOID:8465 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||
DOID:0070097 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12450) | ||||
DOID:8923 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||
DOID:0050632 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442,HGNC:12450,HGNC:2709) | ||||
DOID:12306 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||
DOID:0070095 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||
DOID:0070094 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||
DOID:1909 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442) | ||||
DOID:10123 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12442,HGNC:12450) | ||||
Molecular_info | Corresponding_CDS | C34G6.2 | |||||
Corresponding_transcript | C34G6.2.1 | ||||||
Other_sequence (47) | |||||||
Associated_feature | WBsf656345 | ||||||
WBsf217724 | |||||||
WBsf217725 | |||||||
WBsf217726 | |||||||
Experimental_info | RNAi_result | WBRNAi00098215 | Inferred_automatically | RNAi_primary | |||
WBRNAi00029552 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00003081 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00098219 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00001841 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00041928 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1010270 | ||||||
Expr1037037 | |||||||
Expr1145935 | |||||||
Expr2017688 | |||||||
Expr2035826 | |||||||
Drives_construct | WBCnstr00028083 | ||||||
Construct_product | WBCnstr00028083 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (185) | |||||||
Interaction (25) | |||||||
Map_info | Map | I | Position | 0.475289 | Error | 0.001229 | |
Positive | Positive_clone | C34G6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5068 | |||||
4575 | |||||||
4601 | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00044177 | ||||||
WBPaper00055090 | |||||||
WBPaper00061547 | |||||||
WBPaper00065140 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |