WormBase Tree Display for Gene: WBGene00016419

WBGene00016419 SMap: S_parent: Sequence: C34G6
  Identity: Version: 2
    Name: CGC_name: tyr-4 Person_evidence: WBPerson69
      Sequence_name: C34G6.2
      Molecular_name: C34G6.2
        C34G6.2.1
        CE08574
      Other_name: CELE_C34G6.2 Accession_evidence: NDB BX284601
      Public_name: tyr-4
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 11 Feb 2005 11:34:52 WBPerson2970 Name_change: CGC_name: tyr-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tyr
    Allele (44)
    Strain: WBStrain00031924
    RNASeq_FPKM (74)
    GO_annotation: 00024775
      00122059
    Ortholog: WBGene00066580 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00026773 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00040579 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00163861 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00115223 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00135716 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
      WBGene00191899 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00213961 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00223744 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g12229 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g6402 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g2044 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g3760 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g11145 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g1406 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g8096 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g79 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g15575 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g17017 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00147.g5586 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_09192.g21934 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-tyr-4 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g17088 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01226.g19408 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_04202.g32338 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_09074.g39202 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_14275 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_001023 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13146 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g22413 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10294100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g1021 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00210762 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00237944 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00107503 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00259546 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00259957 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00287143 Trichuris muris From_analysis: WormBase-Compara
      ZFIN:ZDB-GENE-000508-1 Danio rerio From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040718-249 Danio rerio From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-070718-2 Danio rerio From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:2709 Homo sapiens From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:12442 Homo sapiens From_analysis: OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:12450 Homo sapiens From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      MGI:98881 Mus musculus From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1593266 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00009001 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00010060 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00010661 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00015332 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00021553 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00022231 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00017483 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Predicted to enable oxidoreductase activity. Human ortholog(s) of this gene implicated in several diseases, including ocular albinism 1; oculocutaneous albinism (multiple); and vitiligo. Is an ortholog of human DCT (dopachrome tautomerase); TYR (tyrosinase); and TYRP1 (tyrosinase related protein 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0050633 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12442)
      DOID:8465 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12442)
      DOID:0070097 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12450)
      DOID:8923 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12442)
      DOID:0050632 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12442,HGNC:12450,HGNC:2709)
      DOID:12306 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12442)
      DOID:0070095 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12442)
      DOID:0070094 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12442)
      DOID:1909 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12442)
      DOID:10123 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12442,HGNC:12450)
  Molecular_info: Corresponding_CDS: C34G6.2
    Corresponding_transcript: C34G6.2.1
    Other_sequence (47)
    Associated_feature: WBsf656345
      WBsf217724
      WBsf217725
      WBsf217726
  Experimental_info: RNAi_result: WBRNAi00098215 Inferred_automatically: RNAi_primary
      WBRNAi00029552 Inferred_automatically: RNAi_primary
      WBRNAi00003081 Inferred_automatically: RNAi_primary
      WBRNAi00098219 Inferred_automatically: RNAi_primary
      WBRNAi00001841 Inferred_automatically: RNAi_primary
      WBRNAi00041928 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1010270
      Expr1037037
      Expr1145935
      Expr2017688
      Expr2035826
    Drives_construct: WBCnstr00028083
    Construct_product: WBCnstr00028083
    Microarray_results (19)
    Expression_cluster (185)
    Interaction (25)
  Map_info: Map: I Position: 0.475289 Error: 0.001229
    Positive: Positive_clone: C34G6 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5068
        4575
        4601
    Pseudo_map_position
  Reference: WBPaper00044177
    WBPaper00055090
    WBPaper00061547
    WBPaper00065140
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene