WormBase Tree Display for Gene: WBGene00016404

WBGene00016404 SMap: S_parent: Sequence: C34D4
  Identity: Version: 2
    Name: CGC_name: mutd-1 Person_evidence: WBPerson253
      Sequence_name: C34D4.13
      Molecular_name: C34D4.13
        C34D4.13.1
        CE34735
      Other_name: CELE_C34D4.13 Accession_evidence: NDB BX284604
      Public_name: mutd-1
    DB_info: Database: AceView gene 4H896
        WormQTL gene WBGene00016404
        WormFlux gene WBGene00016404
        NDB locus_tag CELE_C34D4.13
        NCBI gene 183210
        RefSeq protein NM_068718.3
        SwissProt UniProtAcc Q18446
        TREEFAM TREEFAM_ID TF320002
        UniProt_GCRP UniProtAcc Q18446
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 31 Aug 2012 11:56:39 WBPerson2970 Name_change: CGC_name: mutd-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mutd
    Allele: WBVar00428125
      WBVar01499395
      WBVar01499396
      WBVar01499633
      WBVar00919678
      WBVar00919679
      WBVar00919680
      WBVar01494712
      WBVar01500245
    RNASeq_FPKM (74)
    GO_annotation: 00061271
      00061272
      00122039
      00122040
    Contained_in_operon: CEOP4212
    Ortholog (26)
    Structured_description: Automated_description: Involved in endosomal transport. Predicted to be located in transport vesicle. Predicted to be part of BLOC-1 complex. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C34D4.13
    Corresponding_CDS_history: C34D4.13:wp105
    Corresponding_transcript: C34D4.13.1
    Other_sequence (11)
    Associated_feature: WBsf667996
      WBsf230224
  Experimental_info: RNAi_result: WBRNAi00029519 Inferred_automatically: RNAi_primary
      WBRNAi00061982 Inferred_automatically: RNAi_primary
      WBRNAi00041871 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1013471
      Expr1037026
      Expr1145888
      Expr2013834
      Expr2032074
    Drives_construct: WBCnstr00028098
    Construct_product: WBCnstr00028098
    Microarray_results (19)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00037682:sma-2_downregulated
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:excretory-cell_larva_enriched
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Gender_Neutral
      WBPaper00045974:NSM_enriched_totalRNA_RNAseq
      WBPaper00045974:NSM_enriched_totalRNA_tiling
      WBPaper00048988:neuron_expressed
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:germline_enriched
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053810:daf-2(e1370)_downregulated
      WBPaper00054493:hpl-2(tm1489)_downregulated
      WBPaper00055354:Metformin_downregulated
      WBPaper00055482:pmt-2(RNAi)_downregulated
      WBPaper00055827:pfd-6(gk493446)_downregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_downregulated_N2
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
      WBPaper00058598:sin-3(tm1276)_upregulated
      WBPaper00058958:100mGy-irradiation-72h_downregulated
      WBPaper00059567:olrn-1(ums9)_regulated
      WBPaper00060014:set-2(tm1630)_upregulated
      WBPaper00060100:SiNP_downregulated_mRNA
      WBPaper00060661:hypoxia_upregulated
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061203:sin-3(tm1276)_downregulated
      WBPaper00061479:HDA-1_interacting_protein
      WBPaper00061527:cyn-10_19153-K12H4.2
      WBPaper00061902:camt-1(ok515)_regulated_RMG
      WBPaper00062193:skn-1(RNAi)_downregulated
      WBPaper00064716:paraquat_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065841:10_0
      WBPaper00065975:P-body_vs_WholeAnimal_enriched
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4489_group_5
      WBPaper00025032:cluster_6
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Enriched_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00030839:Embryo_A_Class
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00035905:FBF-1_Associated
      WBPaper00036286:Pattern_F
      WBPaper00038231:Cry5B_1.5-fold_upregulated
      WBPaper00038427:lin-54_embryo_changed
      WBPaper00039866:ClassComp_daf-19_downregulated
      WBPaper00039866:SAM_daf-19_downregulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00048989:N2_rapamycin_downregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00053550:daf-19(m86)_downregulated_3-fold-embryo
      [cgc5767]:cluster_1
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(186_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MDE
      [cgc5767]:expression_class_MD_pd(23_min)
      [cgc5767]:expression_class_ME
      [cgc6390]:mixed_oogenesis-somatic
    Interaction: WBInteraction000175248
      WBInteraction000215582
      WBInteraction000378618
      WBInteraction000539650
      WBInteraction000575432
      WBInteraction000576326
  Map_info: Map: IV Position: 3.29061
    Positive: Positive_clone: C34D4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene