WormBase Tree Display for Gene: WBGene00016283

WBGene00016283 SMap: S_parent: Sequence: C31B8
  Identity: Version: 2
    Name: CGC_name: zmp-3 Paper_evidence: WBPaper00036427
          Person_evidence: WBPerson345
      Sequence_name: C31B8.8
      Molecular_name: C31B8.8
        C31B8.8.1
        CE26674
      Other_name: CELE_C31B8.8 Accession_evidence: NDB BX284605
      Public_name: zmp-3
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 04 Jan 2016 15:29:00 WBPerson2970 Name_change: CGC_name: zmp-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: zmp
    Allele (172)
    RNASeq_FPKM (74)
    GO_annotation (16)
    Ortholog (73)
    Paralog: WBGene00006987 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00010423 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00010524 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00012185 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00012364 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00019212 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00020646 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00194737 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Enables metallopeptidase activity. Predicted to be involved in collagen catabolic process and extracellular matrix organization. Predicted to be located in extracellular space. Expressed in anchor cell. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); autoimmune disease (multiple); and reproductive organ cancer (multiple). Is an ortholog of several human genes including MMP1 (matrix metallopeptidase 1); MMP3 (matrix metallopeptidase 3); and MMP8 (matrix metallopeptidase 8). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model (74)
  Molecular_info: Corresponding_CDS: C31B8.8
    Corresponding_transcript: C31B8.8.1
    Other_sequence: HG05176
      EX543248.1
      Tcir_isotig12307
      Oden_isotig03666
      Dviv_isotig05758
      Dviv_isotig05754
      HGC12096_1
      Oden_isotig03667
      Oden_isotig03670
      AW506540.1
      HBC02010_1
      Oden_isotig27709
      Dviv_isotig05760
      Oden_isotig03671
      Oden_isotig03665
      Oden_isotig03675
      Acan_isotig05073
      Oden_isotig03668
      ACC14768_1
      BXC01162_1
      Dviv_isotig05759
      Oden_isotig03664
      Oden_isotig03669
      Dviv_isotig05756
      Dviv_isotig05755
      AW506166.1
      Oden_isotig03674
      Oden_isotig03663
      AYC03097_1
      AE03321
      Oden_isotig03676
      TDC03086_1
      GRC00385_1
      Tcol_isotig15907
      Oden_isotig24520
      Dviv_isotig05761
      Oden_isotig03672
      PPC14731_1
      Dviv_isotig05757
      CJC12476_1
      Oden_isotig03677
      Acan_isotig18995
      Hbac_isotig05821
      Oden_isotig03673
      AM743385.1
      ES413073.1
    Associated_feature: WBsf652521
      WBsf233452
  Experimental_info: RNAi_result: WBRNAi00022666 Inferred_automatically: RNAi_primary
      WBRNAi00041600 Inferred_automatically: RNAi_primary
      WBRNAi00088998 Inferred_automatically: RNAi_primary
      WBRNAi00028230 Inferred_automatically: RNAi_primary
      WBRNAi00011430 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr14536
      Expr1016898
      Expr1145626
      Expr2018180
      Expr2036317
    Drives_construct: WBCnstr00021181
      WBCnstr00028192
      WBCnstr00040502
    Construct_product: WBCnstr00021181
      WBCnstr00028192
      WBCnstr00040502
    Antibody: WBAntibody00002300
    Microarray_results: SMD_C31B8.8
      175750_s_at
      A_12_P119002
      Aff_C31B8.8
      GPL13394_WBGene00016283
      GPL13914_C31B8.8
      GPL14144_C31B8.8_1585-1644_0.947_3_B
      GPL14144_C31B8.8_1667-1726_0.955_1_A
      GPL14144_C31B8.8_863-922_0.880_37_C
      GPL19516_CGZ0006868
      GPL21109_C31B8.8
      GPL8304_CE_WBGene00016283_A
      GPL8673_C31B8_8P00617
      GPL8673_C31B8_8P00743
      GPL8673_C31B8_8P01338
      GPL9450_C31B8.8
      cea2.c.34241
    Expression_cluster (183)
    Interaction (12)
  Map_info: Map: V Position: -12.8562
    Positive: Positive_clone: C31B8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00040289
    WBPaper00055090
    WBPaper00056095
    WBPaper00061665
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene