WormBase Tree Display for Gene: WBGene00016172

WBGene00016172 SMap: S_parent: Sequence: C27H5
  Identity: Version: 1
    Name: Sequence_name: C27H5.2
      Molecular_name (12)
      Other_name: CELE_C27H5.2 Accession_evidence: NDB BX284602
      Public_name: C27H5.2
    DB_info: Database: AceView gene 2H449
        WormQTL gene WBGene00016172
        WormFlux gene WBGene00016172
        NDB locus_tag CELE_C27H5.2
        NCBI gene 174176
        RefSeq protein NM_063083.5
            NM_063084.6
            NM_182242.4
            NM_182243.5
        TREEFAM TREEFAM_ID TF343480
        TrEMBL UniProtAcc H2KZ24
            H2KZ25
            Q8IG43
            H2KZ26
        UniProt_GCRP UniProtAcc H2KZ24
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (74)
    RNASeq_FPKM (74)
    GO_annotation: 00022032
    Ortholog (27)
    Paralog: WBGene00001086 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001860 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00003367 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00004873 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00004874 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00010306 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00012198 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00019087 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00044079 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Predicted to be involved in RNA splicing and mRNA processing. Predicted to be located in nucleus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C27H5.2a
      C27H5.2b
      C27H5.2c
      C27H5.2d
    Corresponding_transcript: C27H5.2a.1
      C27H5.2b.1
      C27H5.2c.1
      C27H5.2d.1
    Other_sequence (38)
    Associated_feature (11)
  Experimental_info: RNAi_result: WBRNAi00082911 Inferred_automatically: RNAi_primary
      WBRNAi00011274 Inferred_automatically: RNAi_primary
      WBRNAi00041373 Inferred_automatically: RNAi_primary
      WBRNAi00001173 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1020386
      Expr1036923
      Expr1145407
      Expr2001185
      Expr2019407
    Drives_construct: WBCnstr00028274
    Construct_product: WBCnstr00028274
    Microarray_results (41)
    Expression_cluster (163)
    SAGE_tag: SAGE:tgcaaatctt Strand: Antisense
      SAGE:ttgatgatga Strand: Sense
        Unambiguously_mapped
      SAGE:gaatgatcga Strand: Sense
        Unambiguously_mapped
      SAGE:caagaaatca Strand: Sense
        Unambiguously_mapped
      SAGE:ttgatgatgaactcgct Strand: Sense
        Unambiguously_mapped
      SAGE:gaatgatcgagaatact Strand: Sense
        Unambiguously_mapped
    Interaction (26)
  Map_info: Positive: Positive_clone: C27H5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 0.496185
  Reference: WBPaper00035598
    WBPaper00058717
  Method: Gene