WormBase Tree Display for Gene: WBGene00016172
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WBGene00016172 | SMap | S_parent | Sequence | C27H5 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (74) | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00022032 | |||||
Ortholog (27) | ||||||
Paralog | WBGene00001086 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||
WBGene00001860 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00003367 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00004873 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00004874 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00010306 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00012198 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00019087 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00044079 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Automated_description | Predicted to enable DNA binding activity. Predicted to be involved in RNA splicing and mRNA processing. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | C27H5.2a | ||||
C27H5.2b | ||||||
C27H5.2c | ||||||
C27H5.2d | ||||||
Corresponding_transcript | C27H5.2a.1 | |||||
C27H5.2b.1 | ||||||
C27H5.2c.1 | ||||||
C27H5.2d.1 | ||||||
Other_sequence (38) | ||||||
Associated_feature (11) | ||||||
Experimental_info | RNAi_result | WBRNAi00082911 | Inferred_automatically | RNAi_primary | ||
WBRNAi00011274 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00041373 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00001173 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1020386 | |||||
Expr1036923 | ||||||
Expr1145407 | ||||||
Expr2001185 | ||||||
Expr2019407 | ||||||
Drives_construct | WBCnstr00028274 | |||||
Construct_product | WBCnstr00028274 | |||||
Microarray_results (41) | ||||||
Expression_cluster (163) | ||||||
SAGE_tag | SAGE:tgcaaatctt | Strand | Antisense | |||
SAGE:ttgatgatga | Strand | Sense | ||||
Unambiguously_mapped | ||||||
SAGE:gaatgatcga | Strand | Sense | ||||
Unambiguously_mapped | ||||||
SAGE:caagaaatca | Strand | Sense | ||||
Unambiguously_mapped | ||||||
SAGE:ttgatgatgaactcgct | Strand | Sense | ||||
Unambiguously_mapped | ||||||
SAGE:gaatgatcgagaatact | Strand | Sense | ||||
Unambiguously_mapped | ||||||
Interaction (26) | ||||||
Map_info | Positive | Positive_clone | C27H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | II | 0.496185 | ||||
Reference | WBPaper00035598 | |||||
WBPaper00058717 | ||||||
Method | Gene |