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WormBase Tree Display for Gene: WBGene00015865

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Name Class

WBGene00015865SMapS_parentSequenceC16E9
IdentityVersion1
NameSequence_nameC16E9.1
Molecular_nameC16E9.1
C16E9.1.1
CE35403
Other_nameCELE_C16E9.1Accession_evidenceNDBBX284606
Public_nameC16E9.1
DB_infoDatabaseAceViewgeneXH561
WormQTLgeneWBGene00015865
WormFluxgeneWBGene00015865
NDBlocus_tagCELE_C16E9.1
PanthergeneCAEEL|WormBase=WBGene00015865|UniProtKB=Q18048
familyPTHR24020
NCBIgene182693
RefSeqproteinNM_076775.6
TREEFAMTREEFAM_IDTF330078
TrEMBLUniProtAccQ18048
UniProt_GCRPUniProtAccQ18048
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar01498964
WBVar00507273
WBVar00507274
WBVar00507275
WBVar00507276
WBVar00507277
WBVar00507278
WBVar00507279
WBVar00507280
WBVar00507281
WBVar01835691
WBVar02064538
WBVar02064539
WBVar02064540
WBVar00080173
WBVar00080174
WBVar02139512
WBVar01491145
WBVar01830727
WBVar01820176
WBVar01927082
WBVar01927083
WBVar01157601
WBVar01157602
WBVar01157603
WBVar01157604
WBVar01157605
WBVar01157606
WBVar01157607
WBVar01157608
WBVar01157609
WBVar01157610
WBVar01157611
WBVar01157612
WBVar00236107
WBVar01157613
WBVar01157614
WBVar01157615
WBVar01157616
WBVar01157617
WBVar01157618
WBVar01157619
WBVar01157620
WBVar01157621
WBVar01882535
WBVar01882536
WBVar01882537
WBVar01882538
WBVar01882539
WBVar01882540
WBVar01882541
WBVar01882542
WBVar00035416
WBVar01882543
WBVar01882544
WBVar01882545
WBVar00035421
WBVar01882546
WBVar01500067
WBVar01882547
RNASeq_FPKM (74)
GO_annotation00060067
00060068
00060069
Ortholog (38)
ParalogWBGene00007800Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00015993Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00016048Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000853Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00003482Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00003497Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017965Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019570Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020579Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021343Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be an extracellular matrix structural constituent. Predicted to be involved in extracellular matrix organization. Predicted to be located in collagen-containing extracellular matrix. Is an ortholog of human MATN1 (matrilin 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC16E9.1
Corresponding_CDS_historyC16E9.1:wp107
Corresponding_transcriptC16E9.1.1
Associated_feature (3)
Experimental_infoRNAi_resultWBRNAi00028978Inferred_automaticallyRNAi_primary
WBRNAi00010872Inferred_automaticallyRNAi_primary
WBRNAi00040740Inferred_automaticallyRNAi_primary
Expr_patternExpr1022003
Expr1144785
Expr2000884
Expr2019103
Drives_constructWBCnstr00028502
Construct_productWBCnstr00028502
Microarray_results (19)
Expression_cluster (224)
InteractionWBInteraction000137019
WBInteraction000343151
WBInteraction000372434
WBInteraction000385869
WBInteraction000394016
WBInteraction000419988
WBInteraction000437583
WBInteraction000454106
Map_infoPositivePositive_cloneC16E9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX-1.96459
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00064099
MethodGene