WormBase Tree Display for Gene: WBGene00015471

WBGene00015471 SMap: S_parent: Sequence: C05D9
  Identity: Version: 2
    Name: CGC_name: lmp-2 Person_evidence: WBPerson298
      Sequence_name: C05D9.2
      Molecular_name: C05D9.2
        C05D9.2.1
        CE07928
        C05D9.2.2
        C05D9.2.3
      Other_name: CELE_C05D9.2 Accession_evidence: NDB BX284606
      Public_name: lmp-2
    DB_info: Database: AceView gene XB745
        WormQTL gene WBGene00015471
        WormFlux gene WBGene00015471
        NDB locus_tag CELE_C05D9.2
        Panther gene CAEEL|WormBase=WBGene00015471|UniProtKB=Q9GYK0
          family PTHR11506
        NCBI gene 180467
        RefSeq protein NM_001392725.1
        TREEFAM TREEFAM_ID TF316339
        TrEMBL UniProtAcc Q9GYK0
        UniProt_GCRP UniProtAcc Q9GYK0
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 09 Jun 2005 10:01:00 WBPerson2970 Name_change: CGC_name: lmp-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lmp
    Allele (33)
    RNASeq_FPKM (74)
    GO_annotation: 00092775
      00092776
      00092777
      00092778
      00092779
      00092780
      00092781
      00121372
    Ortholog (35)
    Paralog: WBGene00003053 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Concise_description: lmp-2 encodes a transmembrane protein that is one of two C. elegans LAMP (lysosomal associated membrane glycoprotein) homologs. Paper_evidence: WBPaper00030788
          Curator_confirmed: WBPerson1843
          Date_last_updated: 12 Jun 2008 00:00:00
      Automated_description: Predicted to be involved in establishment of protein localization to organelle. Predicted to be located in late endosome membrane; lysosomal membrane; and plasma membrane. Is an ortholog of human LAMP1 (lysosomal associated membrane protein 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C05D9.2
    Corresponding_transcript: C05D9.2.1
      C05D9.2.2
      C05D9.2.3
    Other_sequence: CBC17005_1
      CJC09270_1
      CBC07432_1
    Associated_feature: WBsf647819
      WBsf235314
  Experimental_info: RNAi_result: WBRNAi00000249 Inferred_automatically: RNAi_primary
      WBRNAi00028504 Inferred_automatically: RNAi_primary
      WBRNAi00010212 Inferred_automatically: RNAi_primary
      WBRNAi00039761 Inferred_automatically: RNAi_primary
      WBRNAi00076085 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr13184
      Expr1021936
      Expr1143848
      Expr2013236
      Expr2031467
    Drives_construct: WBCnstr00028820
    Construct_product: WBCnstr00028820
    Microarray_results (23)
    Expression_cluster (169)
  Map_info: Map: X Position: -18.5049
    Positive: Positive_clone: C05D9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00030788
    WBPaper00030896
    WBPaper00038491
    WBPaper00050406
    WBPaper00050648
    WBPaper00055090
    WBPaper00056693
    WBPaper00059755
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene