WormBase Tree Display for Gene: WBGene00013634
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| WBGene00013634 | SMap | S_parent | Sequence | Y105C5A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | Y105C5A.9 | |||||||
| Molecular_name | Y105C5A.9a | ||||||||
| Y105C5A.9a.1 | |||||||||
| CE47955 | |||||||||
| Y105C5A.9b | |||||||||
| CE50062 | |||||||||
| Y105C5A.9b.1 | |||||||||
| Other_name | CELE_Y105C5A.9 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y105C5A.9 | ||||||||
| DB_info | Database | AceView | gene | 4Q395 | |||||
| WormQTL | gene | WBGene00013634 | |||||||
| WormFlux | gene | WBGene00013634 | |||||||
| NDB | locus_tag | CELE_Y105C5A.9 | |||||||
| NCBI | gene | 190874 | |||||||
| RefSeq | protein | NM_001307169.1 | |||||||
| NM_070476.4 | |||||||||
| TrEMBL | UniProtAcc | D3DEM1 | |||||||
| A0A078BTL3 | |||||||||
| UniProt_GCRP | UniProtAcc | D3DEM1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 29 Jan 2010 15:57:05 | WBPerson4025 | Event | Split_into | WBGene00194951 | ||||
| Split_into | WBGene00194951 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (85) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | CSP29.g14358 | Caenorhabditis becei | From_analysis | WormBase-Compara | |||||
| CSP31.g18194 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
| CSP40.g13238 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
| Csp5_scaffold_00586.g13189 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
| chrIV_pilon.g12647 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00015605 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00015593 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00013636 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00013637 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in intestine based on RNA-seq and microarray studies. Is affected by several genes including skn-1; elt-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by six chemicals including Rifampin; Psoralens; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y105C5A.9a | |||||||
| Y105C5A.9b | |||||||||
| Corresponding_CDS_history | Y105C5A.9:wp234 | ||||||||
| Y105C5A.9a:wp211 | |||||||||
| Y105C5A.9b:wp211 | |||||||||
| Corresponding_transcript | Y105C5A.9a.1 | ||||||||
| Y105C5A.9b.1 | |||||||||
| Associated_feature | WBsf998748 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00019837 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055186 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1158722 | ||||||||
| Expr2006948 | |||||||||
| Microarray_results | SMD_Y105C5A.H | ||||||||
| 186401_at | |||||||||
| Aff_Y105C5.H | |||||||||
| GPL19516_CGZ0040318 | |||||||||
| GPL21109_Y105C5A.9 | |||||||||
| GPL8673_Y105C5A_9aP00029 | |||||||||
| Expression_cluster (57) | |||||||||
| Map_info | Positive | Positive_clone | Y105C5A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 14.239 | |||||||
| Method | Gene |
