WormBase Tree Display for Gene: WBGene00013634
expand all nodes | collapse all nodes | view schema
WBGene00013634 | SMap | S_parent | Sequence | Y105C5A | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | Sequence_name | Y105C5A.9 | |||||
Molecular_name | Y105C5A.9a | ||||||
Y105C5A.9a.1 | |||||||
CE47955 | |||||||
Y105C5A.9b | |||||||
CE50062 | |||||||
Y105C5A.9b.1 | |||||||
Other_name | CELE_Y105C5A.9 | Accession_evidence | NDB | BX284604 | |||
Public_name | Y105C5A.9 | ||||||
DB_info | Database | AceView | gene | 4Q395 | |||
WormQTL | gene | WBGene00013634 | |||||
WormFlux | gene | WBGene00013634 | |||||
NDB | locus_tag | CELE_Y105C5A.9 | |||||
NCBI | gene | 190874 | |||||
RefSeq | protein | NM_001307169.1 | |||||
NM_070476.4 | |||||||
TrEMBL | UniProtAcc | D3DEM1 | |||||
A0A078BTL3 | |||||||
UniProt_GCRP | UniProtAcc | D3DEM1 | |||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Allele (85) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | CSP29.g14358 | Caenorhabditis becei | From_analysis | WormBase-Compara | |||
CSP31.g18194 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||
CSP40.g13238 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||
Csp5_scaffold_00586.g13189 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||
chrIV_pilon.g12647 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Paralog | WBGene00015605 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WormBase-Compara | |||||||
WBGene00015593 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WormBase-Compara | |||||||
WBGene00013636 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WormBase-Compara | |||||||
WBGene00013637 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Enriched in intestine based on RNA-seq and microarray studies. Is affected by several genes including skn-1; elt-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by six chemicals including Rifampin; Psoralens; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y105C5A.9a | |||||
Y105C5A.9b | |||||||
Corresponding_CDS_history | Y105C5A.9:wp234 | ||||||
Y105C5A.9a:wp211 | |||||||
Y105C5A.9b:wp211 | |||||||
Corresponding_transcript | Y105C5A.9a.1 | ||||||
Y105C5A.9b.1 | |||||||
Associated_feature | WBsf998748 | ||||||
Experimental_info | RNAi_result | WBRNAi00019837 | Inferred_automatically | RNAi_primary | |||
WBRNAi00055186 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1158722 | ||||||
Expr2006948 | |||||||
Microarray_results | SMD_Y105C5A.H | ||||||
186401_at | |||||||
Aff_Y105C5.H | |||||||
GPL19516_CGZ0040318 | |||||||
GPL21109_Y105C5A.9 | |||||||
GPL8673_Y105C5A_9aP00029 | |||||||
Expression_cluster (57) | |||||||
Map_info | Positive | Positive_clone | Y105C5A | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | IV | 14.239 | |||||
Method | Gene |