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WormBase Tree Display for Gene: WBGene00013634

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Name Class

WBGene00013634SMapS_parentSequenceY105C5A
Identity (6)
Gene_infoBiotypeSO:0001217
Allele (85)
RNASeq_FPKM (74)
OrthologCSP29.g14358Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g18194Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP40.g13238Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Csp5_scaffold_00586.g13189Caenorhabditis sinicaFrom_analysisWormBase-Compara
chrIV_pilon.g12647Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00015605Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00015593Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00013636Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00013637Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in intestine based on RNA-seq and microarray studies. Is affected by several genes including skn-1; elt-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by six chemicals including Rifampin; Psoralens; and Sirolimus based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY105C5A.9a
Y105C5A.9b
Corresponding_CDS_historyY105C5A.9:wp234
Y105C5A.9a:wp211
Y105C5A.9b:wp211
Corresponding_transcriptY105C5A.9a.1
Y105C5A.9b.1
Associated_featureWBsf998748
Experimental_infoRNAi_resultWBRNAi00019837Inferred_automaticallyRNAi_primary
WBRNAi00055186Inferred_automaticallyRNAi_primary
Expr_patternExpr1158722
Expr2006948
Microarray_resultsSMD_Y105C5A.H
186401_at
Aff_Y105C5.H
GPL19516_CGZ0040318
GPL21109_Y105C5A.9
GPL8673_Y105C5A_9aP00029
Expression_cluster (57)
Map_infoPositivePositive_cloneY105C5AInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV14.239
MethodGene