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WormBase Tree Display for Gene: WBGene00013587

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Name Class

WBGene00013587SMapS_parentSequenceY80D3A
IdentityVersion2
NameCGC_namehrg-10Person_evidenceWBPerson15737
Sequence_nameY80D3A.9
Molecular_nameY80D3A.9
Y80D3A.9.1
CE24678
Other_nameCELE_Y80D3A.9Accession_evidenceNDBBX284605
Public_namehrg-10
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:55WBPerson1971EventImportedInitial conversion from CDS class of WS125
211 Mar 2021 09:37:10WBPerson1983Name_changeCGC_namehrg-10
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhrg
Allele (128)
RNASeq_FPKM (74)
GO_annotation00098294
00098295
00098296
Contained_in_operonCEOP5476
CEOP5578
OrthologWBGene00100465Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00042076Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00067463Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00154548Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00138036Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00211920Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00088749Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00227422Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g1215Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g17369Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g7164Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g19290Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g3292Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9981Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g8071Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g15237Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g7402Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g3072Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00192.g6676Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-Y80D3A.9Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold520.g2812Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01087.g18287Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01087.g18288Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_021611Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10024Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g20403Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50422400Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g17791Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00255527Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00276540Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00260684Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00300909Trichuris murisFrom_analysisWormBase-Compara
WBGene00302265Trichuris murisFrom_analysisWormBase-Compara
SGD:S000003359Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
FB:FBgn0030503Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
ZFIN:ZDB-GENE-040808-42Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
HGNC:25439Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
MGI:101825Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
RGD:1310348Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
ParalogWBGene00011305Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in Golgi organization and protein secretion. Predicted to be located in Golgi apparatus. Expressed in hypodermis. Is an ortholog of human TANGO2 (transport and golgi organization 2 homolog).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0081386Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:25439)
Molecular_infoCorresponding_CDSY80D3A.9
Corresponding_transcriptY80D3A.9.1
Other_sequenceMH10507
MH04728
MI00091
CBC04752_1
OF00077
MI01118
MH06227
MI03938
Associated_featureWBsf235199
Experimental_infoRNAi_resultWBRNAi00037893Inferred_automaticallyRNAi_primary
WBRNAi00058557Inferred_automaticallyRNAi_primary
Expr_patternExpr16357
Expr16359
Expr1019369
Expr1036076
Expr1161960
Expr2008460
Expr2026701
Drives_constructWBCnstr00042973
WBCnstr00042974
Construct_productWBCnstr00042974
Microarray_results (17)
Expression_cluster (122)
InteractionWBInteraction000206297
WBInteraction000297835
WBInteraction000453460
WBInteraction000465888
Map_infoPositivePositive_cloneY80D3AInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV18.4694
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00064607
MethodGene