WormBase Tree Display for CDS: Y80D3A.9
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| Y80D3A.9 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y80D3A | |||
| Structure | Source_exons | 1 | 130 | |||
| 897 | 1019 | |||||
| 1066 | 1177 | |||||
| 2434 | 2516 | |||||
| 2751 | 2904 | |||||
| 3828 | 3926 | |||||
| 4023 | 4161 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q9U1Q8 | ||
| UniProt | UniProtAcc | Q9U1Q8 | ||||
| UniProt_GCRP | UniProtAcc | Q9U1Q8 | ||||
| AlphaFold | entry | Q9U1Q8 | ||||
| NCBI_protein | GI_number | GI:6425533 | ||||
| TREEFAM | TREEFAM_ID | TF315064 | ||||
| Protein_id | CHROMOSOME_V | CAB60443 | 1 | |||
| DB_remark | HRG-10 protein; contains similarity to Pfam domain PF05742 (Transport and Golgi organisation 2); contains similarity to Interpro domain IPR008551 (Transport and Golgi organisation protein 2) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00013587 | ||||
| Corresponding_transcript | Y80D3A.9.1 | |||||
| Corresponding_protein | CE24678 | |||||
| Corresponding_PCR_product | cenix:191-f8 | |||||
| mv_Y80D3A.9 | ||||||
| sjj_Y80D3B.g | ||||||
| Corresponding_oligo_set (16) | ||||||
| Matching_cDNA (29) | ||||||
| RNAi_result | WBRNAi00037893 | |||||
| WBRNAi00058557 | ||||||
| Microarray_results (17) | ||||||
| Brief_identification | DUF833-domain-containing protein | Accession_evidence | UniProt | TR:Q9U1Q8 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf131383 | |||||
| Method | curated |
