WormBase Tree Display for Gene: WBGene00088749

WBGene00088749 SMap: S_parent: Sequence: cb25.NA_046
  Identity: Version: 1
    Name: Sequence_name: CBG27335
      Molecular_name: CBG27335
        CBG27335.1
        CBP33854
      Other_name: CBG_27335 Accession_evidence: NDB HE601191
      Public_name: CBG27335
    DB_info: Database: NDB locus_tag CBG_27335
    Species: Caenorhabditis briggsae
    History: Version_change: 1 23 Jul 2008 11:20:50 WBPerson1847 Event: Imported: nGASP new gene
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000002 1.86465 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        5.59395 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        2.79697 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        3.03015 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        6.52664 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 0.927685 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        1.85537 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        0.618457 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 0 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        0.501244 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        2.50622 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (11)
      WBls:0000027 0.072193 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.099282 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.117296 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0.108289 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.802565 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        2.99368 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 5.80504 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 1.05967 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        2.2048 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        2.38875 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        3.71782 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        4.04173 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 11.728 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        3.08459 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        7.92589 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        8.27635 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        8.44547 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        8.6146 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        4.14369 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        7.34109 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        8.1993 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        8.23783 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
      WBls:0000063 0.257838 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        1.28919 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        0.214865 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 0.099282 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        1.95846 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.108289 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        2.13592 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (32)
    Paralog: WBGene00031062 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00042076 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Transport and Golgi organisation protein 2 and Transport and Golgi organisation 2. Is an ortholog of C. elegans hrg-10. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG27335
    Corresponding_transcript: CBG27335.1
    Other_sequence: OVC08183_1
      CBC04752_1
      BF219591.1
      BF482105.1
      MH04642
  Method: Gene