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WormBase Tree Display for Gene: WBGene00013540

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Name Class

WBGene00013540SMapS_parentSequenceY75B8A
IdentityVersion2
NameCGC_namecest-12Person_evidenceWBPerson36909
WBPerson7188
Sequence_nameY75B8A.3
Molecular_nameY75B8A.3
Y75B8A.3.1
CE47993
Other_nameCELE_Y75B8A.3Accession_evidenceNDBBX284603
Public_namecest-12
DB_infoDatabaseAceViewgene3N192
WormQTLgeneWBGene00013540
WormFluxgeneWBGene00013540
NDBlocus_tagCELE_Y75B8A.3
PanthergeneCAEEL|WormBase=WBGene00013540|UniProtKB=Q9XW75
familyPTHR11559
NCBIgene176642
RefSeqproteinNM_067175.6
TREEFAMTREEFAM_IDTF316715
TrEMBLUniProtAccQ9XW75
UniProt_GCRPUniProtAccQ9XW75
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:55WBPerson1971EventImportedInitial conversion from CDS class of WS125
220 May 2019 14:10:26WBPerson1983Name_changeCGC_namecest-12
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcest
Allele (101)
RNASeq_FPKM (74)
Ortholog (35)
Paralog (40)
Structured_descriptionAutomated_descriptionEnriched in Psub1; alimentary muscle; pharynx; and rectal muscle based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray; tiling array; and RNA-seq studies. Is affected by eleven chemicals including Ethanol; methylmercuric chloride; and rotenone based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Alpha/Beta hydrolase fold; Carboxylesterase, type B; Phosphorylation site; and Carboxylesterase family.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY75B8A.3
Corresponding_CDS_historyY75B8A.3:wp85
Y75B8A.3:wp227
Y75B8A.3:wp229
Y75B8A.3:wp234
Corresponding_transcriptY75B8A.3.1
Other_sequenceJI169095.1
Associated_featureWBsf994573
WBsf994574
WBsf994575
WBsf994576
WBsf994577
WBsf1016146
WBsf1016147
WBsf1016148
WBsf1016149
Experimental_infoRNAi_resultWBRNAi00058461Inferred_automaticallyRNAi_primary
WBRNAi00001153Inferred_automaticallyRNAi_primary
WBRNAi00006834Inferred_automaticallyRNAi_primary
WBRNAi00021448Inferred_automaticallyRNAi_primary
WBRNAi00037846Inferred_automaticallyRNAi_primary
Expr_patternExpr1028233
Expr1036045
Expr1161876
Expr2008422
Expr2026663
Drives_constructWBCnstr00029603
Construct_productWBCnstr00029603
Microarray_results (18)
Expression_clusterWBPaper00030922:glycosylated_protein
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:pharyngeal-muscle_embryo_enriched
WBPaper00037950:pharyngeal-muscle_embryo_SelectivelyEnriched
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00040560:hpl-2_L3_downregulated
WBPaper00040990:PA14_upregulated
WBPaper00041954:ethanol_upregulated
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00044037:eat-2_upregulated
WBPaper00044316:CH3HgCl_7.5uM_upregulated
WBPaper00044426:rotenone_5day_downregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00045017:blmp-1(tm548)_upregulated
WBPaper00045257:bar-1(ga80)_upregulated
WBPaper00045774:clk-1_upregulated
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00046691:P1_enriched
WBPaper00047132:glp-1(ts)-25C_upregulated
WBPaper00049018:swsn-2.2(RNAi)_downregulated
WBPaper00049368:daf-2(e1370)_downregulated
WBPaper00049498:npr-1(ur89)_regulated_4
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
WBPaper00050121:mir-60(n4947)_upregulated
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:pharynx_enriched
WBPaper00050990:pharynx_expressed
WBPaper00051265:F1_hrde-1(tm1200)_upregulated
WBPaper00051265:F4_hrde-1(tm1200)_upregulated
WBPaper00051404:alg-1(gk214)_upregulated
WBPaper00051404:alg-2(ok304)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00054410:set-26(tm2467)_upregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055354:Metformin_upregulated
WBPaper00055354:Psora_upregulated
WBPaper00055354:Rapamycin-Psora_upregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056039:hda-6(ok3203)_upregulated
WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
WBPaper00056169:rrf-3(pk1426)_upregulated_L4
WBPaper00056218:daf-16(mu86)_downregulated_Day7
WBPaper00056284:ints-4(RNAi)_upregulated
WBPaper00056443:DietaryRestriction_downregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057041:spc-1(cas971)_downregulated
WBPaper00057041:unc-70(cas983)_downregulated
WBPaper00057068:Cadmium_upregulated
WBPaper00057068:numr-1(RNAi)_downregulated_Cadmium
WBPaper00057143:ztf-11(RNAi)_upregulated
WBPaper00057154:HeatShock_downregulated_mRNA
WBPaper00057288:iff-1(RNAi)_upregulated_transcript
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058665:graphene-oxide_upregulated_mRNA
WBPaper00058678:DAF-12_upregulated_PVD
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00058925:acox-1.1(ok2257)_upregulated
WBPaper00058927:high-redox-state_downregulated
WBPaper00058948:PA14_downregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059566:wdr-23(mac32)_upregulated
WBPaper00059735:glucose_upregulated_lpin-1(RNAi)
WBPaper00059735:glucose_upregulated_N2
WBPaper00059739:hira-1(gk835598)_upregulated_adult
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00059839:S.maltophilia_regulated
WBPaper00060100:SiNP_upregulated_mRNA
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060764:swsn-9(ok1354)_upregulated
WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061007:X.citri_upregulated
WBPaper00061340:Intestinal_and_rectal_muscle
WBPaper00061340:pm1_pm2
WBPaper00061341:28C_1h_downregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061527:tnt-4-myo-1_2160
WBPaper00061530:nhr-49(e2144)_downregulated
WBPaper00061653:alh-4(hj221)_upregulated
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00061995:mter-4(syb3662syb3403)_upregulated
WBPaper00062118:neural-HSF-1_upregulated
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062440:crh-1(n3315)_upregulated
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
WBPaper00064005:starvation_downregulated_N2_mRNA
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064532:pals-25(icb98)_upregulated
WBPaper00064539:nhr-114(gk849)_upregulated
WBPaper00064769:him-17(me24)_upregulated
WBPaper00065225:nhr-42(tm1375)_upregulated_S.aureus-infected
WBPaper00065258:anchor-cell_depleted
WBPaper00065746:eat-2(ad1113)_downregulated
WBPaper00065841:9_0
WBPaper00065841:9_1
WBPaper00065841:24_0
WBPaper00065841:24_1
WBPaper00065841:26_0
WBPaper00065841:26_1
WBPaper00065841:26_2
WBPaper00065841:78_0
WBPaper00065926:pgph-2(overepxreesion)_upregulated_glucose
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066005:RAGA-1_degradation_somatic_upregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00031252:AIN-2_IP_enriched
WBPaper00032165:differentially_expressed_with_age_medoid_2
WBPaper00032948:FedUp
WBPaper00035905:FBF-1_Associated
WBPaper00038172:crh-1null_up_regulated
WBPaper00038172:tax-6null_up_regulated
WBPaper00040210:Chlorpyrifos_24C_regulated
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00041174:environmental
WBPaper00041174:genotypic
WBPaper00041174:genotypic_and_environmental
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041906:I-3690_vs_OP50_3d
WBPaper00045015:acs-3(ft5)_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00046548:dafachronic-acid_downregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00048989:N2_rapamycin_upregulated
[cgc6390]:Cluster_C
Interaction (5)
Map_infoPositivePositive_cloneY75B8AInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII14.8814
ReferenceWBPaper00065331
MethodGene