WormBase Tree Display for Gene: WBGene00013237

WBGene00013237 SMap: S_parent: Sequence: Y56A3A
  Identity: Version: 3
    Name: CGC_name: ndab-1 Person_evidence: WBPerson25803
            WBPerson545
            WBPerson555
      Sequence_name: Y56A3A.19
      Molecular_name: Y56A3A.19
        Y56A3A.19.1
        CE22587
      Other_name: CELE_Y56A3A.19 Accession_evidence: NDB BX284603
      Public_name: ndab-1
    DB_info: Database: AceView gene 3N4
        WormQTL gene WBGene00013237
        WormFlux gene WBGene00013237
        NDB locus_tag CELE_Y56A3A.19
        Panther gene CAEEL|WormBase=WBGene00013237|UniProtKB=Q9U241
          family PTHR20863
        NCBI gene 176622
        RefSeq protein NM_067148.6
        TREEFAM TREEFAM_ID TF314361
        TrEMBL UniProtAcc Q9U241
        UniProt_GCRP UniProtAcc Q9U241
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Jan 2023 20:48:33 WBPerson51134 Name_change: CGC_name: ndab-1
        3 16 Jan 2023 18:37:21 WBPerson51134 Name_change: CGC_name: ndab-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ndab
    Allele (26)
    Strain: WBStrain00001895
    RNASeq_FPKM (74)
    GO_annotation: 00098709
      00098710
      00098711
      00098712
      00098713
      00120138
    Contained_in_operon: CEOP3738
    Ortholog (34)
    Paralog: WBGene00018151 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00013236 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable acyl binding activity and acyl carrier activity. Predicted to be involved in fatty acid biosynthetic process. Predicted to be located in mitochondrion. Predicted to be part of mitochondrial respiratory chain complex I. Is an ortholog of human NDUFAB1 (NADH:ubiquinone oxidoreductase subunit AB1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y56A3A.19
    Corresponding_transcript: Y56A3A.19.1
    Other_sequence (48)
    Associated_feature: WBsf651525
      WBsf227612
      WBsf227613
  Experimental_info: RNAi_result (14)
    Expr_pattern: Chronogram350
      Expr7069
      Expr1010331
      Expr1035895
      Expr1161006
      Expr2007999
      Expr2026240
    Drives_construct: WBCnstr00002686
    Microarray_results (23)
    Expression_cluster: WBPaper00027339:daf-12(rh273)_downregulated
      WBPaper00028451:Low_abundance_spermatogenesis_enriched
      WBPaper00032425:up_in_rde-4
      WBPaper00032528:L3_enriched
      WBPaper00035073:mitochondria_protein
      WBPaper00037086:biotin_regulated
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038118:aak-2(gt33)_downregulated
      WBPaper00038168:lin-15B(n744)_downregulated
      WBPaper00040285:H2S_24hr_upregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Gender_Neutral
      WBPaper00046217:mev-1(kn1)_upregulated
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_expressed
      WBPaper00049498:npr-1(ur89)_regulated_6
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
      WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:downregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051558:aging_regulated
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053289:DREAM-target
      WBPaper00053388:dauer_regulated_Cluster6
      WBPaper00053713:Pheromone-induced_postdauer_vs_control_downregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055648:germline_expressed
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_downregulated_N2
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00056809:smn-1(ok355)_downregulated
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00058691:cfp-1(tm6369)_upregulated
      WBPaper00060100:SiNP_downregulated_mRNA
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061341:28C_48h_downregulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061527:dld-1-skn-1_16701
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00064005:starvation_downregulated_aptf-1(gk794)_mRNA
      WBPaper00064005:starvation_downregulated_N2_mRNA
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064201:SNA-3_interacting
      WBPaper00065158:AFD_depleted
      cgc4386_cluster_3_5
      cgc4489_group_3
      WBPaper00025032:cluster_8
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00031003:24hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031832:slr-2_regulated
      WBPaper00032948:FedUp
      WBPaper00036123:Fluoranthene_regulated
      WBPaper00036286:Pattern_G
      WBPaper00036375:depleted_in_PVD_OLL
      WBPaper00037113:Diazinon_16C_regulated
      WBPaper00038231:Cry5B_1.5-fold_downregulated
      WBPaper00040210:Chlorpyrifos_16C_regulated
      WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
      WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
      WBPaper00040858:eQTL_regulated_juvenile
      WBPaper00040858:eQTL_regulated_old
      WBPaper00040858:eQTL_regulated_reproductive
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_EtBr-exposed_24h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00042128:gei-8(ok1671)_downregulated
      WBPaper00047070:N2_starvation_downregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      [cgc5767]:cluster_6
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MD_pd(23_min)
      [cgc5767]:expression_class_SM
      [cgc5767]:expression_class_SMD
    Interaction (224)
  Map_info: Positive: Positive_clone: Y56A3A Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III 13.3792
  Reference: WBPaper00029254
    WBPaper00038491
    WBPaper00042257
    WBPaper00055090
  Method: Gene