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WormBase Tree Display for Gene: WBGene00012600

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Name Class

WBGene00012600SMapS_parentSequenceY38E10A
IdentityVersion2
NameSequence_nameY38E10A.22
Molecular_nameY38E10A.22a
Y38E10A.22a.1
CE47846
Y38E10A.22b
CE35653
Y38E10A.22c
CE47962
Y38E10A.22b.1
Y38E10A.22c.1
Other_nameCELE_Y38E10A.22Accession_evidenceNDBBX284602
Public_nameY38E10A.22
DB_infoDatabaseAceViewgene2M958
WormQTLgeneWBGene00012600
WormFluxgeneWBGene00012600
NDBlocus_tagCELE_Y38E10A.22
PanthergeneCAEEL|WormBase=WBGene00012600|UniProtKB=H2KMK6
familyPTHR19316
NCBIgene189667
RefSeqproteinNM_001267424.3
NM_001267423.6
NM_001267425.4
TREEFAMTREEFAM_IDTF343318
TrEMBLUniProtAccE8MDV8
Q9NAI9
H2KMK6
UniProt_GCRPUniProtAccH2KMK6
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:54WBPerson1971EventImportedInitial conversion from CDS class of WS125
217 Oct 2011 15:07:28WBPerson1983EventAcquires_mergeWBGene00012601
Acquires_mergeWBGene00012601
StatusLive
Gene_infoBiotypeSO:0001217
Allele (199)
RNASeq_FPKM (74)
GO_annotation00008412
00008413
Ortholog (22)
Structured_descriptionAutomated_descriptionPredicted to enable adenyl-nucleotide exchange factor activity. Predicted to be located in endoplasmic reticulum.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY38E10A.22a
Y38E10A.22b
Y38E10A.22c
Corresponding_CDS_historyY38E10A.22:wp109
Y38E10A.22a:wp234
Y38E10A.22c:wp234
Corresponding_transcriptY38E10A.22a.1
Y38E10A.22b.1
Y38E10A.22c.1
Other_sequenceCRC01068_1
CR02586
Associated_featureWBsf650664
WBsf666262
WBsf990171
WBsf1013478
WBsf224089
WBsf224090
WBsf224091
Experimental_infoRNAi_resultWBRNAi00056022Inferred_automaticallyRNAi_primary
WBRNAi00020289Inferred_automaticallyRNAi_primary
WBRNAi00036845Inferred_automaticallyRNAi_primary
Expr_patternExpr1024621
Expr1035572
Expr1159541
Expr2007302
Expr2025535
Microarray_results (27)
Expression_clusterWBPaper00032031:DConiospora_downregulated_OligoArray_24h
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00035269:cde-1_regulated
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038289:oocyte_protein
WBPaper00040221:DAF-12_target_ALF4
WBPaper00042561:smg-2(RNAi)_downregulated
WBPaper00044426:rotenone_24h_downregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00044746:aging_upregulated_Day5
WBPaper00045417:128Q-huntingtin_upreglated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Gender_Neutral
WBPaper00045774:clk-1_downregulated
WBPaper00046421:cdc-48.2(tm659)_upregulated
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050686:glp-1(e2141)_downregulated
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:body-muscle_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:germline_enriched
WBPaper00051245:body-wall-muscle_cytoplasm_expressed
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051245:epidermis_nucleus_expressed
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00051245:pharyngeal-muscle_cytoplasm_expressed
WBPaper00051558:aging_regulated
WBPaper00051558:fog-2(q71)_regulated
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053289:DREAM-target
WBPaper00053302:zidovudine_72h_regulated
WBPaper00055226:ADR-2_target_N2
WBPaper00055334:DLC-1_interacting
WBPaper00055565:AVK_enriched
WBPaper00055827:daf-2(e1370)_downregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056443:sek-1(km4)_downregulated
WBPaper00056826:SGP_biased
WBPaper00057006:DietaryRestriction_upregulated
WBPaper00057154:HeatShock_upregulated_mRNA
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00058691:cfp-1(tm6369)_upregulated
WBPaper00059490:dcr-1(m9375)_downregulated
WBPaper00059598:HeatShock_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060661:sensory-neuron_depleted
WBPaper00061007:HB101_downregulated
WBPaper00061007:S.aquatilis_downregulated
WBPaper00061274:microgravity_upregulated
WBPaper00061466:nath-10(icb99)_upregulated
WBPaper00061466:nath-10(icb102)_upregulated
WBPaper00061478:SUMO-conjugated_protein
WBPaper00061479:HDA-1_interacting_protein
WBPaper00061527:pro-3_11683-C44E4.1_9745
WBPaper00061527:tub-2_4713-daf-2_5288
WBPaper00062143:PQN-59_interacting
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062345:bortezomib_4h_upregulated_N2
WBPaper00062345:bortezomib_4h_upregulated_zip-1(jy13)
WBPaper00062456:doxycycline_downregulated_CB4856_protein
WBPaper00062590:Aging_downregulated_neuron
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064071:NHR-49_interacting
WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
WBPaper00064716:paraquat_upregulated
WBPaper00064871:hypoxia_upregulated_F2
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065225:nhr-42(tm1375)_downregulated_uninfected
WBPaper00065315:mating_upregulated_Day2-7
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065373:sek-1(km4)_upregulated_cisplatin
WBPaper00065749:Heat-Shock_upregulated_endu-2(tm4977)
WBPaper00065749:Heat-Shock_upregulated_N2
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066110:tetraploid_vs_diploid_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4489_group_17
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026980:intestine_enriched
WBPaper00027111:eri-1(mg366)_upregulated
WBPaper00027758:Group_IV
WBPaper00030985:Erwinia_carotovora_upregulated
WBPaper00032062:age_regulated_genes
WBPaper00032165:differentially_expressed_with_age_medoid_2
WBPaper00034739:N2lessDR1350
WBPaper00036286:Pattern_H
WBPaper00037695:WC_5-day
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00044091:Bpseudomallei_induced_12h
WBPaper00045015:nhr-25(RNAi)_downregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00045294:0.1uM_TBBP_downregulated
WBPaper00045294:50uM_DBAA_downregulated
WBPaper00045960:L1-L4-lethargus_downregulated
WBPaper00045960:L4-lethargus_downregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00048989:N2_rapamycin_downregulated
InteractionWBInteraction000539677
WBInteraction000557819
WBInteraction000559581
WBInteraction000568036
WBInteraction000568775
WBInteraction000574129
WBInteraction000574892
WBInteraction000583847
WBInteraction000584177
Map_infoPositivePositive_cloneY38E10AInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII10.6818
MethodGene