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WormBase Tree Display for Gene: WBGene00011874

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Name Class

WBGene00011874SMapS_parentSequenceT20G5
IdentityVersion1
NameSequence_nameT20G5.13
Molecular_nameT20G5.13
T20G5.13.1
CE30303
Other_nameCELE_T20G5.13Accession_evidenceNDBBX284603
Public_nameT20G5.13
DB_infoDatabaseAceViewgene3L290
WormQTLgeneWBGene00011874
WormFluxgeneWBGene00011874
NDBlocus_tagCELE_T20G5.13
PanthergeneCAEEL|WormBase=WBGene00011874|UniProtKB=Q8T3C6
familyPTHR46705
NCBIgene260150
RefSeqproteinNM_171225.2
TREEFAMTREEFAM_IDTF315483
TrEMBLUniProtAccQ8T3C6
UniProt_GCRPUniProtAccQ8T3C6
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:53WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (22)
RNASeq_FPKM (74)
Ortholog (19)
Paralog (18)
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABalaaaarl; ABalaaaarr; ABplpappaa; FLP; and excretory cell based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on tiling array; RNA-seq; and microarray studies. Is affected by five chemicals including sucrose; stearic acid; and Atrazine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: DB module and Domain of unknown function DB.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST20G5.13
Corresponding_transcriptT20G5.13.1
Other_sequenceEX537900.1
EX540229.1
ACC38413_1
Associated_featureWBsf227419
Experimental_infoRNAi_resultWBRNAi00053659Inferred_automaticallyRNAi_primary
WBRNAi00018932Inferred_automaticallyRNAi_primary
WBRNAi00063171Inferred_automaticallyRNAi_primary
WBRNAi00053661Inferred_automaticallyRNAi_primary
WBRNAi00063170Inferred_automaticallyRNAi_primary
WBRNAi00006184Inferred_automaticallyRNAi_primary
Expr_patternExpr1016445
Expr1157215
Expr2006301
Expr2024521
Drives_constructWBCnstr00030319
Construct_productWBCnstr00030319
Microarray_results (17)
Expression_clusterWBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00040221:DAF-12_target_ALF4
WBPaper00045934:wrn-1(gk99)_downregulated
WBPaper00046805:csr-1(RNAi)_upregulated_Set1
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00053888:drh-3(rrr2)_upregulated
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055013:spt-16(RNAi)_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056826:SGP_biased
WBPaper00057068:ints-4(RNAi)_upregulated
WBPaper00057068:ints-4(RNAi)_upregulated_Cadmium
WBPaper00058678:DAF-12_upregulated_PVD
WBPaper00058691:cfp-1(tm6369)_downregulated
WBPaper00058691:sin-3(tm1276)_downregulated
WBPaper00058955:heatshock_upregulated_CE
WBPaper00059253:sucrose_downregulated
WBPaper00059253:sucrose_stearic-acid_downregulated
WBPaper00059471:EGL-43_interacting
WBPaper00059987:Wounding_upregulated
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060014:set-2(zr2012)_upregulated
WBPaper00061340:Excretory_cell
WBPaper00061340:Excretory_cell_parent
WBPaper00061340:FLP
WBPaper00061340:RME_LR_parent
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00062103:neuron_enriched
WBPaper00065841:57_0
WBPaper00065841:57_1
cgc4489_group_25
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00032062:age_regulated_genes
WBPaper00032165:differentially_expressed_with_age_medoid_2
WBPaper00036123:Atrazine_regulated
WBPaper00036123:Cadmium_regulated
WBPaper00036130:mir-243_up_regulated
WBPaper00036286:Pattern_H
WBPaper00040210:Chlorpyrifos_16C_regulated
[cgc5976]:class_1
Map_infoPositivePositive_cloneT20G5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII2.00944
MethodGene