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WormBase Tree Display for Gene: WBGene00011672

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Name Class

WBGene00011672SMapS_parentSequenceT10B9
IdentityVersion2
NameCGC_namecyp-13A5
Sequence_nameT10B9.2
Molecular_nameT10B9.2
T10B9.2.1
CE01656
Other_nameCELE_T10B9.2Accession_evidenceNDBBX284602
Public_namecyp-13A5
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
221 Sep 2004 09:38:16WBPerson1971Name_changeCGC_namecyp-13A5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcyp
Allele (36)
RNASeq_FPKM (74)
GO_annotation00079947
00079948
00079949
00118899
00118900
00118901
00118902
OrthologWBGene00024322Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00024327Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
WormBase-Compara
WBGene00024351Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00024561Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00067223Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00162595Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00131554Caenorhabditis japonicaFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00128819Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00191122Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00213308Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00092752Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00104757Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00119176Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00095336Pristionchus pacificusFrom_analysisInparanoid_8
CSP21.g13632Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g8455Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g7740Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP32.g2810Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP40.g22857Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g22859Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g2333Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00173.g6203Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_II.g4009Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g8940Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01510.g21369Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01510.g21370Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_004786Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g20388Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g22855Panagrellus redivivusFrom_analysisWormBase-Compara
chrII_pilon.g5595Caenorhabditis elegansFrom_analysisWormBase-Compara
FB:FBgn0033304Drosophila melanogasterFrom_analysisInparanoid
OMA
SonicParanoid
FB:FBgn0033978Drosophila melanogasterFrom_analysisInparanoid
OMA
SonicParanoid
FB:FBgn0033979Drosophila melanogasterFrom_analysisInparanoid
OMA
SonicParanoid
FB:FBgn0033980Drosophila melanogasterFrom_analysisInparanoid
OMA
SonicParanoid
FB:FBgn0033982Drosophila melanogasterFrom_analysisOMA
OrthoFinder
SonicParanoid
FB:FBgn0038194Drosophila melanogasterFrom_analysisInparanoid
OMA
SonicParanoid
FB:FBgn0015714Drosophila melanogasterFrom_analysisInparanoid
OMA
SonicParanoid
FB:FBgn0031726Drosophila melanogasterFrom_analysisInparanoid
OMA
SonicParanoid
ZFIN:ZDB-GENE-041114-102Danio rerioFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-050604-1Danio rerioFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-060929-96Danio rerioFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-030131-8805Danio rerioFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
HGNC:2640Homo sapiensFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
HGNC:2637Homo sapiensFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
HGNC:2638Homo sapiensFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
HGNC:11609Homo sapiensFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
HGNC:17450Homo sapiensFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
HGNC:51504Homo sapiensFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
MGI:88609Mus musculusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
MGI:88610Mus musculusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
MGI:106099Mus musculusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
MGI:98497Mus musculusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
MGI:1858451Mus musculusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
MGI:1930638Mus musculusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
MGI:2449818Mus musculusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
MGI:3646373Mus musculusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
MGI:3714859Mus musculusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
MGI:3769707Mus musculusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
RGD:3826Rattus norvegicusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
RGD:628626Rattus norvegicusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
RGD:1595919Rattus norvegicusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
RGD:708392Rattus norvegicusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
RGD:628709Rattus norvegicusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
RGD:708379Rattus norvegicusFrom_analysisInparanoid
OMA
OrthoInspector
SonicParanoid
Paralog (12)
Structured_description (2)
Disease_infoPotential_modelDOID:8552Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:2638)
DOID:3526Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11609)
DOID:2987Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:2637)
DOID:9952Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:2638)
DOID:0112251Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11609)
DOID:0080630Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:2638)
DOID:10825Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:2638)
DOID:1612Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:2637)
Molecular_infoCorresponding_CDST10B9.2
Corresponding_transcriptT10B9.2.1
Other_sequenceJI174138.1
Oden_isotig14710
Acan_isotig21796
Associated_featureWBsf223709
WBsf223710
Experimental_infoRNAi_resultWBRNAi00018525Inferred_automaticallyRNAi_primary
WBRNAi00070152Inferred_automaticallyRNAi_primary
WBRNAi00053015Inferred_automaticallyRNAi_primary
WBRNAi00035421Inferred_automaticallyRNAi_primary
WBRNAi00092623Inferred_automaticallyRNAi_primary
Expr_patternExpr1156616
Expr2010685
Expr2028924
Drives_constructWBCnstr00030481
Construct_productWBCnstr00030481
Microarray_results (14)
Expression_cluster (327)
Interaction (36)
Map_infoMapIIPosition1.7164Error0.000227
PositivePositive_cloneT10B9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00037579
WBPaper00038491
WBPaper00042257
WBPaper00055090
WBPaper00064073
WBPaper00064598
WBPaper00065331
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene