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WormBase Tree Display for Gene: WBGene00024561

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Name Class

WBGene00024561SMapS_parentSequencecb25.fpc0023
IdentityVersion1
NameSequence_nameCBG01302
Molecular_name (12)
Other_nameCBG_01302Accession_evidenceNDBHE601256
Public_nameCBG01302
DB_infoDatabaseNDBlocus_tagCBG_01302
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00135778
WBVar00135784
WBVar00135779
WBVar00135780
WBVar00135781
WBVar00135782
WBVar00135783
RNASeq_FPKMWBls:00000020.446577From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.53798From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.564306From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.708361From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.62317From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.660524From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.949178From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.027313From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.029932From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.058982From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.063366From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.751604From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
23.4396From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.60347From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
9.26489From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.20734From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
2.40541From_analysisRNASeq.briggsae.WBls:0000027.control_median
7.2505From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000351.72049From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.06763From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.61486From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.31674From_analysisRNASeq.briggsae.WBls:0000038.control_median
3.46148From_analysisRNASeq.briggsae.WBls:0000038.control_mean
4.01861From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
6.14484From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.58218From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.874554From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.989957From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.10536From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.45282From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.24919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.51602From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.76967From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.92669From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
2.88005From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.654569From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.755755From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.772127From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.07778From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.2743From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.544756From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.713348From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.720589From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001011.06763From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.28759From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.911866From_analysisRNASeq.briggsae.total_over_all_stages.control_median
1.94731From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00127911
00127912
00127913
00127914
Contained_in_operonCBOPA0061
Ortholog (62)
ParalogWBGene00024324Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00024320Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024321Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024322Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024326Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024327Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024351Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027804Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027805Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00270422Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable heme binding activity; iron ion binding activity; and oxidoreductase activity. Is an ortholog of C. elegans cyp-13A12; cyp-13A5; and cyp-13A4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01302
Corresponding_CDS_historyCBG01302:bp194
Corresponding_transcriptCBG01302.1
CBG01302.2
CBG01302.3
CBG01302.4
CBG01302.5
CBG01302.6
CBG01302.7
CBG01302.8
CBG01302.9
CBG01302.10
Experimental_infoExpr_patternExpr1053456
Microarray_resultsGPL8303_CB6_WBGene00024561_A
GPL8303_CB6_WBGene00024561_B
GPL14143_CBG01302_368-427_0.806_66_B
GPL14143_CBG01302_1240-1299_0.930_10_A
GPL14143_CBG01302_1389-1448_0.936_6_C
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene