WormBase Tree Display for Gene: WBGene00024320

WBGene00024320 SMap: S_parent: Sequence: cb25.fpc0022b
  Identity: Version: 2
    Name: CGC_name: Cbr-cyp-13A6 From_analysis: Inferred_from_orthology
      Sequence_name: CBG01027
      Molecular_name: CBG01027
        CBG01027.1
        CBP05893
      Other_name: CBG_01027 Accession_evidence: NDB HE600951
      Public_name: Cbr-cyp-13A6
    DB_info: Database: NDB locus_tag CBG_01027
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:54 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-cyp-13A6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cyp
    RNASeq_FPKM: WBls:0000002 0.246791 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.313636 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0.360174 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.520096 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        0.158457 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        0.280214 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        0.309745 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 0.032744 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
        0.065488 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
        0.230786 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
        0.29126 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
        0.363625 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        1.38901 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
        0.299518 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
      WBls:0000027 0.022192 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.066575 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.033287 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.050715 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.136284 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 0.228302 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.22464 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        0.241063 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        0.273499 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        0.322359 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        0.417252 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 0.020003 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.057412 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.064621 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.071831 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.181344 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.576131 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0.315221 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.34611 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.558612 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        0.792672 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 0.127833 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        0.20113 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0.238527 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.331067 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        0.532604 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        0.164482 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        0.198772 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 0.066575 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.196971 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.066031 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.193636 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00127645
      00127646
      00127647
      00127648
    Contained_in_operon: CBOPA0550
    Ortholog (21)
    Paralog: WBGene00024321 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00024322 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00024326 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00024327 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00024351 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00024561 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027804 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027805 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00270422 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable heme binding activity; iron ion binding activity; and oxidoreductase activity. Is an ortholog of C. elegans cyp-13A6. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG01027
    Corresponding_CDS_history: CBG01027:bp194
    Corresponding_transcript: CBG01027.1
    Other_sequence (21)
  Experimental_info: Expr_pattern: Expr1057625
    Microarray_results: GPL8303_CB6_WBGene00024320_A
      GPL14143_CBG01027_345-404_0.784_9_B
      GPL14143_CBG01027_1255-1314_0.766_27_A
      GPL14143_CBG01027_1372-1431_0.760_32_C
  Method: Gene