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WormBase Tree Display for Gene: WBGene00011464

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Name Class

WBGene00011464SMapS_parentSequenceT05B9
IdentityVersion1
NameSequence_nameT05B9.1
Molecular_nameT05B9.1
T05B9.1.1
CE02310
Other_nameCELE_T05B9.1Accession_evidenceNDBBX284602
Public_nameT05B9.1
DB_infoDatabaseAceViewgene2L548
WormQTLgeneWBGene00011464
WormFluxgeneWBGene00011464
NDBlocus_tagCELE_T05B9.1
NCBIgene174718
RefSeqproteinNM_064008.4
TrEMBLUniProtAccQ22215
UniProt_GCRPUniProtAccQ22215
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (19)
RNASeq_FPKM (74)
OrthologchrII_pilon.g5907Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00045062Caenorhabditis elegansFrom_analysismodENCODE_Pseudogenes
Structured_descriptionAutomated_descriptionEnriched in several structures, including germ line; germline precursor cell; head mesodermal cell; neurons; and pharyngeal muscle cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; hsf-1; and gld-1 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by ten chemicals including manganese chloride; Zidovudine; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST05B9.1
Corresponding_transcriptT05B9.1.1
Associated_featureWBsf650558
WBsf650559
WBsf989683
WBsf989684
WBsf223913
Experimental_infoRNAi_resultWBRNAi00008091Inferred_automaticallyRNAi_primary
WBRNAi00052479Inferred_automaticallyRNAi_primary
WBRNAi00018212Inferred_automaticallyRNAi_primary
WBRNAi00035184Inferred_automaticallyRNAi_primary
WBRNAi00103505Inferred_automaticallyRNAi_primary
Expr_patternExpr1013989
Expr1035044
Expr1156104
Expr2005861
Expr2024078
Drives_constructWBCnstr00030635
Construct_productWBCnstr00030635
Microarray_results (15)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00032097:CGH-1-associated-mRNA
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:BAG-neuron_embryo_enriched
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:germline-precursors_embryo_enriched
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_embryo_enriched
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_embryo_enriched
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00040560:hpl-2_L3_upregulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(gk119)_downregulated
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_downregulated
WBPaper00045050:drh-3 (ne4253)_downregulated
WBPaper00045417:128Q-huntingtin_upreglated
WBPaper00045521:Oogenic
WBPaper00045571:germline-ablation_downregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00048611:MnCl2_downregulated
WBPaper00048762:FOG-1_associated
WBPaper00048762:FOG-3_associated
WBPaper00048988:neuron_expressed
WBPaper00049498:npr-1(ur89)_regulated_6
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050193:lsm-1(tm3585)_upregulated_L3
WBPaper00050193:met-2(n4256)set-25(n5021)_upregulated_L1
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:starvation_regulated_LowSalt
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:downregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:germline_enriched
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053295:lin-22(icb38)_downregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053321:embryo-to-L1_downregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
WBPaper00053321:PGCs_enriched_NuGen
WBPaper00053388:dauer_regulated_Cluster2
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
WBPaper00053810:daf-2(e1370)_downregulated
WBPaper00054191:H3.3(null)_L1_upregulated
WBPaper00054792:FOG-3_interacting
WBPaper00055103:thoc-5(wy822)_downregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Rapamycin-Allantoin_upregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055648:germline_expressed
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_downregulated_N2
WBPaper00056284:ints-5(RNAi)_downregulated
WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056826:hmc_biased
WBPaper00057041:spc-1(cas971)_upregulated
WBPaper00057041:unc-70(cas983)_upregulated
WBPaper00057154:HeatShock_downregulated_mRNA
WBPaper00057288:Cold_downregulated_transcript
WBPaper00058598:mex-1(or286)_downregulated
WBPaper00058598:mex-3(eu149)_downregulated
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00058691:cfp-1(tm6369)_upregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00059174:MEG-3_interacting
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00059739:hira-1(gk835598)_upregulated_L1
WBPaper00059739:hira-1(gk835598)_upregulated_L4
WBPaper00059895:wounding_downregulated
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060445:ikb-1(nr2027)_upregulated_L4
WBPaper00060445:nfki-1(cer1)_upregulated_L4
WBPaper00060661:sensory-neuron_depleted
WBPaper00060683:hlh-11(ko1)_downregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060871:M.humicola-infection_12h_regulated
WBPaper00060886:met-2(n4256)_upregulated
WBPaper00060886:spr-5(by101);met-2(n4256)_upregulated
WBPaper00060886:spr-5(by101)_upregulated
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061007:HB101_downregulated
WBPaper00061007:S.aquatilis_downregulated
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061203:spr-1(ok2144)_downregulated
WBPaper00061274:hypergravity_10xg_upregulated
WBPaper00061274:hypergravity_15xg_upregulated
WBPaper00061340:Germline
WBPaper00061340:RIC
WBPaper00061527:T22D1.5-inx-14
WBPaper00062056:lin-37(n758)_downregulated
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062446:nhr-8(hd117)_downregulated
WBPaper00062498:PPM-1.D_interacting
WBPaper00064005:starvation_downregulated_aptf-1(gk794)_mRNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064107:lin-35(n745)_downregulated
WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
WBPaper00064315:mrg-1(qa6200)_downregulated_PGCs
WBPaper00064403:Heat-killed-E.Coli_upregulated
WBPaper00064716:paraquat_upregulated
WBPaper00065258:anchor-cell_depleted
WBPaper00065841:3_0
WBPaper00065975:P-body_vs_WholeAnimal_enriched
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066110:tetraploid_vs_diploid_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4489_group_2
WBPaper00024393:strongly_regulated_dauer_genes
WBPaper00025032:cluster_3
WBPaper00025141:unc-4::GFP_Enriched_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00030839:Embryo_A_Class
WBPaper00031252:AIN-1_IP_enriched
WBPaper00034739:RIL17moreRIL14
WBPaper00035905:FBF-1_Associated
WBPaper00036286:Pattern_F
WBPaper00037147:heatshock_upregulated
WBPaper00037695:LD_3-day
WBPaper00037901:GLD-1_mRNA_targets
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2down
WBPaper00040963:TA300_down
WBPaper00041002:HF_3d_2.0mM_Down
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00048624:hlh-25(ok1710)_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00051387:Triclosan_downregulated
[cgc5767]:cluster_3
[cgc5767]:expression_class_M
[cgc5767]:expression_class_MD
[cgc5767]:expression_class_MD_pd(66_min)
[cgc5767]:expression_class_SM
[cgc5767]:expression_class_SMD
[cgc6390]:Cluster_E
[cgc6390]:oogenesis-enriched
Interaction (242)
Map_infoPositivePositive_cloneT05B9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII3.38679
ReferenceWBPaper00060886
MethodGene