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WormBase Tree Display for Gene: WBGene00010221

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Name Class

WBGene00010221SMapS_parentSequenceF57G12
IdentityVersion1
NameSequence_nameF57G12.1
Molecular_nameF57G12.1
F57G12.1.1
CE03426
Other_nameCELE_F57G12.1Accession_evidenceNDBBX284606
Public_nameF57G12.1
DB_infoDatabaseAceViewgeneXM788
WormQTLgeneWBGene00010221
WormFluxgeneWBGene00010221
NDBlocus_tagCELE_F57G12.1
NCBIgene181381
RefSeqproteinNM_001392859.1
TrEMBLUniProtAccQ20955
UniProt_GCRPUniProtAccQ20955
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:51WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (47)
StrainWBStrain00047570
RNASeq_FPKM (74)
Ortholog (19)
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABalaaaarl; body wall musculature; intestine; neurons; and rectal muscle based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-12; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by sixteen chemicals including 1-methylnicotinamide; Alovudine; and Zidovudine based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF57G12.1
Corresponding_transcriptF57G12.1.1
Other_sequenceMH03727
CRC01048_1
CR07880
CR01387
Associated_feature (46)
Experimental_infoRNAi_resultWBRNAi00000247Inferred_automaticallyRNAi_primary
WBRNAi00048888Inferred_automaticallyRNAi_primary
WBRNAi00015901Inferred_automaticallyRNAi_primary
WBRNAi00033042Inferred_automaticallyRNAi_primary
Expr_patternExpr1027122
Expr1034456
Expr1152633
Expr2004357
Expr2022582
Drives_constructWBCnstr00031575
Construct_productWBCnstr00031575
Microarray_results (22)
Expression_clusterWBPaper00032031:DConiospora_downregulated_cDNA_24h
WBPaper00032976:dosage_compensated_genes
WBPaper00033065:clk-1(qm30)_upregulated
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037950:coelomocytes_embryo_enriched
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:dopaminergic-neurons_larva_enriched
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:hypodermis_larva_enriched
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00040221:DAF-12_target_ALF4
WBPaper00044260:1-methylnicotinamide_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_upregulated
WBPaper00045774:clk-1_upregulated
WBPaper00048988:neuron_expressed
WBPaper00049018:ham-3(RNAi)_downregulated
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00050344:PLM-neuron_enriched
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050412:cco-1(RNAi)_upregulated_N2
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00050990:seam_expressed
WBPaper00051404:alg-1(gk214)_upregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(icb38)_upregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053302:alovudine_72h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053321:embryo-to-L1_downregulated_WT_SMARTseq
WBPaper00053321:lin-15B(RNAi)_downregulated_starved-L1_Truseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_L1_SMARTseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053814:15C_downregulated_OP50
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055334:DLC-1_interacting
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055969:electromagnetic-field_downregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056139:soil-microbiota_upregulated
WBPaper00056161:hermaphrodite_enriched_siRNA
WBPaper00056167:ifo-1(kc2)_upregulated
WBPaper00056443:DietaryRestriction_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057041:unc-70(cas983)_downregulated
WBPaper00057149:prgn-1(tm985)_downregulated
WBPaper00057154:HeatShock_downregulated_mRNA
WBPaper00057154:HeatShock_upregulated_miRNA-target
WBPaper00057288:Cold_upregulated_transcript
WBPaper00057288:iff-1(RNAi)_upregulated_transcript
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058691:cfp-1(tm6369)_downregulated
WBPaper00058691:sin-3(tm1276)_downregulated
WBPaper00059027:neuron-synapses_depleted
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059421:daf-1(m40);daf-3(mgDf90)_downregulated
WBPaper00059471:EGL-43_interacting
WBPaper00059537:ngn-1(ok2200)_downregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059763:neuron_expressed
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061203:let-418(n3536)_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:AVH_parent
WBPaper00061340:BWM_far_posterior
WBPaper00061340:DVC_parent
WBPaper00061340:g2_parent
WBPaper00061340:I1_parent
WBPaper00061340:Intestinal_and_rectal_muscle
WBPaper00061340:M1_parent
WBPaper00061340:Neuroblast_AVG_RIR
WBPaper00061340:Neuroblast_HSN_PHB
WBPaper00061340:Parents_of_PHsh_hyp8_hyp9
WBPaper00061340:Parent_of_exc_gland_AVK
WBPaper00061340:Parent_of_K_Kprime
WBPaper00061340:Parent_of_MI_pm1DR
WBPaper00061340:Parent_of_tail_spike_and_hyp10
WBPaper00061340:PLM_ALN_grandparent
WBPaper00061340:PLM_ALN_great_grandparent
WBPaper00061340:PVQ_parent
WBPaper00061340:RIA_parent
WBPaper00061340:RID_parent
WBPaper00061340:RME_LR_parent
WBPaper00061405:S.aureus_downregulated_starvation
WBPaper00061466:nath-10(icb102)_downregulated
WBPaper00061479:hda-1(ne4748)_upregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061479:ubc-9(ne4833)_upregulated
WBPaper00061527:ldb-1_2877-scd-1_3086
WBPaper00061527:pptr-1-F08D12.1
WBPaper00061651:HSN_enriched
WBPaper00061651:I3_enriched
WBPaper00061651:PHso_enriched
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062345:bortezomib_4h_downregulated_N2
WBPaper00062345:bortezomib_4h_downregulated_zip-1(jy13)
WBPaper00062497:xpf-1(tm2842)_upregulated
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064716:paraquat_downregulated
WBPaper00064871:hypoxia_downregulated_F2
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065158:25C_vs_15C_upregulated_AFD
WBPaper00065158:25C_vs_15C_upregulated_WholeAnimal
WBPaper00065258:anchor-cell_enriched
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065749:Heat-Shock_downregulated_N2
WBPaper00065835:Day11_vs_Day1_upregulated
WBPaper00065975:P-body_vs_oocyte_enriched
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
cgc4386_cluster_6_3
cgc4489_group_20
WBPaper00005475:Aging-regulated
WBPaper00025032:cluster_10
WBPaper00025032:cluster_140
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00027111:rrf-2(ok210)_upregulated
WBPaper00029437:dcr-1_upregulated
WBPaper00030839:Larval_Pan_Neuronal
WBPaper00031003:hlh_1_enriched
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031252:AIN-2_IP_enriched
WBPaper00031832:slr-2_regulated
WBPaper00032948:StarveUp2
WBPaper00034661:AgNPs_downregulated
WBPaper00034739:N2lessDR1350
WBPaper00035084:L1_enriched_AIN-2_IP
WBPaper00035084:L2_enriched_AIN-2_IP
WBPaper00035084:L3_enriched_AIN-2_IP
WBPaper00035084:L4_enriched_AIN-2_IP
WBPaper00035227:heat_shock_regulated
WBPaper00035905:FBF-1_Associated
WBPaper00036286:Pattern_I
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040985:AIN-2_asynchronous_intestine
WBPaper00040985:AIN-2_asynchronous_muscle
WBPaper00040985:AIN-2_L4_intestine
WBPaper00041002:HF_11d_0.2mM_Up
WBPaper00041174:environmental
WBPaper00041174:genotypic
WBPaper00041174:genotypic_and_environmental
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_3h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_3h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00042548:miRISC_enriched
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045960:L1-L4-lethargus_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00046548:dafachronic-acid_downregulated
WBPaper00046639:tyrosol_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(101_min)
[cgc5767]:expression_class_SE
[cgc5767]:expression_class_SE_pi(101_min)
InteractionWBInteraction000325208
WBInteraction000392996
WBInteraction000444361
WBInteraction000544771
Map_infoPositivePositive_cloneF57G12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX7.00786
MethodGene