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WormBase Tree Display for Gene: WBGene00009979

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Name Class

WBGene00009979SMapS_parentSequenceF53F1
IdentityVersion2
NameCGC_namecutl-1Person_evidenceWBPerson52
Sequence_nameF53F1.1
Molecular_nameF53F1.1
F53F1.1.1
CE47606
Other_nameCELE_F53F1.1Accession_evidenceNDBBX284605
Public_namecutl-1
DB_infoDatabaseAceViewgene5N884
WormQTLgeneWBGene00009979
WormFluxgeneWBGene00009979
NDBlocus_tagCELE_F53F1.1
PanthergeneCAEEL|WormBase=WBGene00009979|UniProtKB=Q9XVM7
familyPTHR22907
NCBIgene186168
RefSeqproteinNM_073920.4
TREEFAMTREEFAM_IDTF315307
TrEMBLUniProtAccQ9XVM7
UniProt_GCRPUniProtAccQ9XVM7
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
207 May 2008 10:04:34WBPerson2970Name_changeCGC_namecutl-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcutl
Allele (29)
RNASeq_FPKM (74)
GO_annotation00102626
Ortholog (17)
ParalogWBGene00000851Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000853Caenorhabditis elegansFrom_analysisPanther
WBGene00001063Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00004301Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00008482Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008978Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009041Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00009961Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011948Caenorhabditis elegansFrom_analysisTreeFam
WBGene00013960Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011104Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012165Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021919Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011443Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011928Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00010893Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011888Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013145Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017351Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019426Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013180Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015231Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021025Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012304Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020663Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017421Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018787Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021396Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021950Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00022533Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00044641Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF53F1.1
Corresponding_CDS_historyF53F1.1:wp188
F53F1.1:wp227
F53F1.1:wp231
Corresponding_transcriptF53F1.1.1
Other_sequencePT01957
BM01590
HC08770
Associated_featureWBsf1001813
WBsf1001814
WBsf1001815
WBsf1001816
WBsf1020717
WBsf1020718
WBsf1020719
WBsf1020720
Experimental_infoRNAi_resultWBRNAi00048128Inferred_automaticallyRNAi_primary
WBRNAi00015512Inferred_automaticallyRNAi_primary
Expr_patternExpr1022907
Expr1151938
Expr2010616
Expr2028856
Microarray_results (22)
Expression_cluster (50)
InteractionWBInteraction000370383
Map_infoMapVPosition5.25536Error0.005791
PositivePositive_cloneF53F1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene