WormBase Tree Display for Gene: WBGene00011948
expand all nodes | collapse all nodes | view schema
| WBGene00011948 | SMap | S_parent | Sequence | T23F1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rocf-1 | Person_evidence | WBPerson7514 | |||||
| Sequence_name | T23F1.5 | ||||||||
| Molecular_name | T23F1.5 | ||||||||
| T23F1.5.1 | |||||||||
| CE14078 | |||||||||
| Other_name | CELE_T23F1.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | rocf-1 | ||||||||
| DB_info | Database | AceView | gene | 5P940 | |||||
| WormQTL | gene | WBGene00011948 | |||||||
| WormFlux | gene | WBGene00011948 | |||||||
| NDB | locus_tag | CELE_T23F1.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011948|UniProtKB=O18117 | |||||||
| family | PTHR22907 | ||||||||
| NCBI | gene | 180041 | |||||||
| RefSeq | protein | NM_074447.6 | |||||||
| TREEFAM | TREEFAM_ID | TF315307 | |||||||
| TrEMBL | UniProtAcc | O18117 | |||||||
| UniProt_GCRP | UniProtAcc | O18117 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 11 Jun 2018 11:44:56 | WBPerson1983 | Name_change | CGC_name | rocf-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rocf | ||||||||
| Allele (97) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00031412 | ||||||||
| Ortholog (30) | |||||||||
| Paralog (38) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T23F1.5 | |||||||
| Corresponding_transcript | T23F1.5.1 | ||||||||
| Other_sequence | JI164424.1 | ||||||||
| Dviv_isotig24347 | |||||||||
| FK804194.1 | |||||||||
| ACC35888_1 | |||||||||
| ACC33883_1 | |||||||||
| EY469098.1 | |||||||||
| EY459152.1 | |||||||||
| Associated_feature | WBsf653452 | ||||||||
| WBsf669775 | |||||||||
| WBsf1002284 | |||||||||
| WBsf1021017 | |||||||||
| WBsf235061 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00000544 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00053936 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035865 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023041 | ||||||||
| Expr1035275 | |||||||||
| Expr1157481 | |||||||||
| Expr2006404 | |||||||||
| Expr2024623 | |||||||||
| Drives_construct | WBCnstr00030261 | ||||||||
| Construct_product | WBCnstr00030261 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (157) | |||||||||
| Interaction | WBInteraction000271751 | ||||||||
| WBInteraction000299051 | |||||||||
| WBInteraction000329154 | |||||||||
| WBInteraction000411545 | |||||||||
| Map_info | Map | V | Position | 8.24258 | |||||
| Positive | Positive_clone | T23F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
