WormBase Tree Display for Gene: WBGene00021396
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| WBGene00021396 | SMap | S_parent | Sequence | Y38C1AA | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cutl-24 | Person_evidence | WBPerson52 | |||||
| Sequence_name | Y38C1AA.5 | ||||||||
| Molecular_name | Y38C1AA.5a | ||||||||
| Y38C1AA.5a.1 | |||||||||
| CE33862 | |||||||||
| Y38C1AA.5b | |||||||||
| CE37281 | |||||||||
| Y38C1AA.5b.1 | |||||||||
| Other_name | Y38C1AA.f | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y38C1AA.5 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | cutl-24 | ||||||||
| DB_info | Database | AceView | gene | 4A921 | |||||
| WormQTL | gene | WBGene00021396 | |||||||
| WormFlux | gene | WBGene00021396 | |||||||
| NDB | locus_tag | CELE_Y38C1AA.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021396|UniProtKB=Q688Z8 | |||||||
| family | PTHR46560 | ||||||||
| NCBI | gene | 176831 | |||||||
| RefSeq | protein | NM_001028278.6 | |||||||
| NM_001028279.6 | |||||||||
| TREEFAM | TREEFAM_ID | TF318465 | |||||||
| TrEMBL | UniProtAcc | H2KZW9 | |||||||
| Q688Z8 | |||||||||
| UniProt_GCRP | UniProtAcc | Q688Z8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 07 May 2008 10:04:34 | WBPerson2970 | Name_change | CGC_name | cutl-24 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cutl | ||||||||
| Allele (81) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022612 | ||||||||
| Ortholog (30) | |||||||||
| Paralog (29) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y38C1AA.5a | |||||||
| Y38C1AA.5b | |||||||||
| Corresponding_CDS_history | Y38C1AA.5:wp98 | ||||||||
| Y38C1AA.5:wp129 | |||||||||
| Y38C1AA.5c:wp261 | |||||||||
| Corresponding_transcript | Y38C1AA.5a.1 | ||||||||
| Y38C1AA.5b.1 | |||||||||
| Other_sequence | JI178587.1 | ||||||||
| EX558431.1 | |||||||||
| ACC28030_1 | |||||||||
| EY460737.1 | |||||||||
| JI166428.1 | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055987 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055986 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026199 | ||||||||
| Expr1039347 | |||||||||
| Expr1159506 | |||||||||
| Expr2010621 | |||||||||
| Expr2028861 | |||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (163) | |||||||||
| Map_info | Map | IV | Position | -26.8812 | Error | 0.004142 | |||
| Positive | Positive_clone | Y38C1AA | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00064782 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
