WormBase Tree Display for Gene: WBGene00009319
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| WBGene00009319 | SMap | S_parent | Sequence | F32B6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mccc-1 | Person_evidence | WBPerson1997 | |||||
| Sequence_name | F32B6.2 | ||||||||
| Molecular_name | F32B6.2 | ||||||||
| F32B6.2.1 | |||||||||
| CE35517 | |||||||||
| Other_name | CELE_F32B6.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | mccc-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 24 May 2012 16:25:35 | WBPerson2970 | Name_change | CGC_name | mccc-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mccc | ||||||||
| Allele (40) | |||||||||
| Strain | WBStrain00003137 | ||||||||
| WBStrain00054654 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00034488 | ||||||||
| 00034489 | |||||||||
| 00034490 | |||||||||
| 00034491 | |||||||||
| 00034492 | |||||||||
| 00034493 | |||||||||
| 00034494 | |||||||||
| 00117040 | |||||||||
| Ortholog (47) | |||||||||
| Paralog | WBGene00017864 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00004076 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00004258 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00012131 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | mccc-1 encodes an ortholog of the human gene ALPHA METHYLCROTONOYL-COENZYME A CARBOXYLASE 1 (MCCC1; 3-MCC), which when mutated leads to beta-methylcrotonyl-glycinuria (OMIM:210200). | Paper_evidence | WBPaper00004637 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson1823 | |||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 26 Jun 2012 00:00:00 | ||||||||
| Automated_description | Predicted to enable ATP binding activity and ligase activity. Predicted to contribute to methylcrotonoyl-CoA carboxylase activity. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in 3-Methylcrotonyl-CoA carboxylase 1 deficiency. Is an ortholog of human MCCC1 (methylcrotonyl-CoA carboxylase subunit 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080579 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6936) | ||||
| Molecular_info | Corresponding_CDS | F32B6.2 | |||||||
| Corresponding_CDS_history | F32B6.2:wp109 | ||||||||
| Corresponding_transcript | F32B6.2.1 | ||||||||
| Other_sequence (50) | |||||||||
| Associated_feature | WBsf646261 | ||||||||
| WBsf228897 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00031663 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00046113 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00106992 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014204 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00106969 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1957 | ||||||||
| Expr5931 | |||||||||
| Expr1013969 | |||||||||
| Expr1034073 | |||||||||
| Expr1149996 | |||||||||
| Expr2013445 | |||||||||
| Expr2031679 | |||||||||
| Drives_construct | WBCnstr00003620 | ||||||||
| WBCnstr00032290 | |||||||||
| Construct_product | WBCnstr00032290 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (141) | |||||||||
| Interaction (178) | |||||||||
| Map_info | Map | IV | Position | 4.43716 | |||||
| Positive | Positive_clone | F32B6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00042204 | |||||||||
| WBPaper00045076 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061818 | |||||||||
| WBPaper00062388 | |||||||||
| WBPaper00064323 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
