WormBase Tree Display for Gene: WBGene00004076
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| WBGene00004076 | SMap | S_parent | Sequence | W09B6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pod-2 | Person_evidence | WBPerson26 | |||||
| Sequence_name | W09B6.1 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | phi-47 | Person_evidence | WBPerson2582 | ||||||
| CELE_W09B6.1 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | pod-2 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 19 Aug 2005 11:54:06 | WBPerson2970 | Event | Acquires_merge | WBGene00021102 | ||||
| Acquires_merge | WBGene00021102 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pod | ||||||||
| Allele (335) | |||||||||
| Possibly_affected_by | WBVar02153249 | ||||||||
| Strain | WBStrain00008572 | ||||||||
| WBStrain00049317 | |||||||||
| WBStrain00054654 | |||||||||
| WBStrain00054709 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (25) | |||||||||
| Ortholog (46) | |||||||||
| Paralog | WBGene00012131 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00004258 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00009319 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00017864 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | pod-2 encodes an acetyl-CoA carboxylase; by sequence similarity, POD-2 is predicted to catalyze the first step in de novo fatty acid biosynthesis; pod-2 is required for proper embryonic polarity and for osmotic protection of the eggshell; pod-2 activity is also required for molting. | Paper_evidence | WBPaper00004706 | |||||
| WBPaper00005095 | |||||||||
| WBPaper00024324 | |||||||||
| WBPaper00026763 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 14 Oct 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable acetyl-CoA carboxylase activity. Involved in several processes, including establishment or maintenance of epithelial cell apical/basal polarity; nematode larval development; and polarity specification of anterior/posterior axis. Predicted to be located in endoplasmic reticulum membrane and mitochondrion. Expressed in CANL; CANR; and excretory duct. Used to study muscular disease. Is an ortholog of human ACACA (acetyl-CoA carboxylase alpha). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Experimental_model | DOID:0080000 | Homo sapiens | Paper_evidence | WBPaper00061805 | ||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 25 Apr 2022 00:00:00 | ||||||||
| Models_disease_in_annotation | WBDOannot00001162 | ||||||||
| Molecular_info | Corresponding_CDS | W09B6.1a | |||||||
| W09B6.1b | |||||||||
| W09B6.1c | |||||||||
| Corresponding_transcript | W09B6.1a.1 | ||||||||
| W09B6.1a.2 | |||||||||
| W09B6.1a.3 | |||||||||
| W09B6.1a.4 | |||||||||
| W09B6.1b.1 | |||||||||
| W09B6.1c.1 | |||||||||
| Other_sequence (71) | |||||||||
| Associated_feature (18) | |||||||||
| Experimental_info | RNAi_result (24) | ||||||||
| Expr_pattern | Chronogram1203 | ||||||||
| Expr6859 | |||||||||
| Expr9289 | |||||||||
| Expr12921 | |||||||||
| Expr15196 | |||||||||
| Expr1021344 | |||||||||
| Expr1031965 | |||||||||
| Expr1158544 | |||||||||
| Expr2014988 | |||||||||
| Expr2033223 | |||||||||
| Drives_construct | WBCnstr00003313 | ||||||||
| WBCnstr00013878 | |||||||||
| WBCnstr00023095 | |||||||||
| Regulate_expr_cluster | WBPaper00038215:pod-2(RNAi)_regulated | ||||||||
| Microarray_results (29) | |||||||||
| Expression_cluster (167) | |||||||||
| Interaction (107) | |||||||||
| Map_info | Map | II | Position | -15.5649 | |||||
| Positive | Positive_clone | W09B6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5516 | |||||||
| 4672 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (45) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
