WormBase Tree Display for Gene: WBGene00009221
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WBGene00009221 | SMap | S_parent | Sequence | F28F8 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | acs-2 | Person_evidence | WBPerson7030 | |||||
WBPerson2239 | |||||||||
WBPerson237 | |||||||||
Sequence_name | F28F8.2 | ||||||||
Molecular_name | F28F8.2 | ||||||||
F28F8.2.1 | |||||||||
CE09756 | |||||||||
Other_name | CELE_F28F8.2 | Accession_evidence | NDB | BX284605 | |||||
Public_name | acs-2 | ||||||||
DB_info | Database (10) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 23 Mar 2005 15:36:05 | WBPerson2970 | Name_change | CGC_name | acs-2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | acs | ||||||||
Allele (76) | |||||||||
Strain | WBStrain00032584 | ||||||||
Component_of_genotype | WBGenotype00000151 | ||||||||
WBGenotype00000152 | |||||||||
WBGenotype00000153 | |||||||||
WBGenotype00000154 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00031987 | ||||||||
00031988 | |||||||||
00031989 | |||||||||
00031990 | |||||||||
Ortholog (38) | |||||||||
Paralog | WBGene00016849 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00018269 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00018579 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00018488 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00006351 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00007969 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00012356 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00013440 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Concise_description | acs-2 encodes an acyl-CoA synthetase; by homology, ACS-2 is predicted to catalyze conversion of a fatty acid to Acyl-CoA for subsequent beta oxidation; accordingly, loss of acs-2 activity via RNAi results in defects in fat metabolism; an ACS-2::GFP reporter fusion protein is widely expressed and appears to localize to mitochondria; acs-2 expression is positively regulated by the NHR-49 nuclear hormone receptor. | Paper_evidence | WBPaper00005655 | |||||
WBPaper00025114 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 17 Mar 2009 00:00:00 | ||||||||
Automated_description | Predicted to enable medium-chain fatty acid-CoA ligase activity. Involved in fatty acid metabolic process. Located in mitochondrion. Expressed in body wall musculature; hypodermis; intestine; neurons; and pharynx. Is an ortholog of human ACSF2 (acyl-CoA synthetase family member 2). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Experimental_model | DOID:3146 | Homo sapiens | Paper_evidence | WBPaper00039810 | ||||
Curator_confirmed | WBPerson324 | ||||||||
Date_last_updated | 31 Jul 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F28F8.2 | |||||||
Corresponding_transcript | F28F8.2.1 | ||||||||
Other_sequence (21) | |||||||||
Associated_feature | WBsf662130 | ||||||||
WBsf1002313 | |||||||||
WBsf1021034 | |||||||||
WBsf233036 | |||||||||
Experimental_info | RNAi_result (11) | ||||||||
Expr_pattern | Expr3469 | ||||||||
Expr3780 | |||||||||
Expr1014898 | |||||||||
Expr1034024 | |||||||||
Expr1149753 | |||||||||
Expr2009213 | |||||||||
Expr2027450 | |||||||||
Drives_construct | WBCnstr00011406 | ||||||||
WBCnstr00011655 | |||||||||
WBCnstr00021644 | |||||||||
Construct_product | WBCnstr00011406 | ||||||||
WBCnstr00011655 | |||||||||
Microarray_results (25) | |||||||||
Expression_cluster (473) | |||||||||
Interaction (73) | |||||||||
Map_info | Map | V | Position | 8.35712 | Error | 0.005311 | |||
Positive | Positive_clone | F28F8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (52) | |||||||||
Picture | WBPicture0000013098 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |