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WormBase Tree Display for Gene: WBGene00007340

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Name Class

WBGene00007340SMapS_parentSequenceC05D12
IdentityVersion1
NameSequence_nameC05D12.2
Molecular_nameC05D12.2
C05D12.2.1
CE52734
Other_nameCELE_C05D12.2Accession_evidenceNDBBX284602
Public_nameC05D12.2
DB_infoDatabaseAceViewgene2L713
WormQTLgeneWBGene00007340
WormFluxgeneWBGene00007340
NDBlocus_tagCELE_C05D12.2
PanthergeneCAEEL|WormBase=WBGene00007340|UniProtKB=Q17657
familyPTHR47324
NCBIgene174741
RefSeqproteinNM_001365322.2
TREEFAMTREEFAM_IDTF320379
TrEMBLUniProtAccQ17657
UniProt_GCRPUniProtAccQ17657
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:47WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (79)
RNASeq_FPKM (74)
Ortholog (25)
ParalogWBGene00018237Caenorhabditis elegansFrom_analysisTreeFam
WBGene00022858Caenorhabditis elegansFrom_analysisTreeFam
WBGene00012018Caenorhabditis elegansFrom_analysisTreeFam
WBGene00017892
WBGene00014666Caenorhabditis elegansFrom_analysisInparanoid_8
WormBase-Compara
WBGene00019957Caenorhabditis elegansFrom_analysisTreeFam
WBGene00021233Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Structured_descriptionAutomated_descriptionEnriched in head mesodermal cell and intestine based on RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by fifteen chemicals including rotenone; Zidovudine; and Psoralens based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC05D12.2
Corresponding_CDS_historyC05D12.2:wp90
C05D12.2:wp266
Corresponding_transcriptC05D12.2.1
Other_sequenceCRC00218_1
Associated_featureWBsf1013236
Experimental_infoRNAi_resultWBRNAi00028499Inferred_automaticallyRNAi_primary
WBRNAi00039744Inferred_automaticallyRNAi_primary
WBRNAi00010202Inferred_automaticallyRNAi_primary
Expr_patternExpr1026381
Expr1143835
Expr2000466
Expr2018689
Drives_constructWBCnstr00033817
Construct_productWBCnstr00033817
Microarray_results (18)
Expression_cluster (169)
InteractionWBInteraction000355397
WBInteraction000547102
Map_infoPositivePositive_cloneC05D12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII3.46535
ReferenceWBPaper00060662
WBPaper00065331
MethodGene