WormBase Tree Display for Gene: WBGene00019957
expand all nodes | collapse all nodes | view schema
| WBGene00019957 | SMap | S_parent | Sequence | R08E3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | R08E3.1 | |||||||
| Molecular_name | R08E3.1a | ||||||||
| R08E3.1a.1 | |||||||||
| CE51999 | |||||||||
| R08E3.1b | |||||||||
| CE52022 | |||||||||
| R08E3.1b.1 | |||||||||
| R08E3.1b.2 | |||||||||
| Other_name | CELE_R08E3.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | R08E3.1 | ||||||||
| DB_info | Database | AceView | gene | XF453 | |||||
| WormQTL | gene | WBGene00019957 | |||||||
| WormFlux | gene | WBGene00019957 | |||||||
| NDB | locus_tag | CELE_R08E3.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019957|UniProtKB=Q21850 | |||||||
| family | PTHR24044 | ||||||||
| NCBI | gene | 180758 | |||||||
| RefSeq | protein | NM_001351880.3 | |||||||
| NM_001380951.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF320379 | |||||||
| TrEMBL | UniProtAcc | Q7Z1P7 | |||||||
| Q21850 | |||||||||
| UniProt_GCRP | UniProtAcc | Q21850 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 28 Apr 2017 01:35:57 | WBPerson1983 | Event | Acquires_merge | WBGene00019958 | ||||
| Acquires_merge | WBGene00019958 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (422) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00073123 | ||||||||
| Ortholog (24) | |||||||||
| Paralog | WBGene00007340 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00012018 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00014666 | |||||||||
| WBGene00017892 | |||||||||
| WBGene00018237 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00022858 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00021233 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Automated_description | Predicted to enable Notch binding activity. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R08E3.1a | |||||||
| R08E3.1b | |||||||||
| Corresponding_CDS_history | R08E3.1:wp98 | ||||||||
| R08E3.1a:wp259 | |||||||||
| R08E3.1b:wp259 | |||||||||
| Corresponding_transcript | R08E3.1a.1 | ||||||||
| R08E3.1b.1 | |||||||||
| R08E3.1b.2 | |||||||||
| Other_sequence | CJC05251_1 | ||||||||
| CBC05219_1 | |||||||||
| CJC12135_1 | |||||||||
| Associated_feature | WBsf648047 | ||||||||
| WBsf235632 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00017590 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00051548 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017589 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051549 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025663 | ||||||||
| Expr1028996 | |||||||||
| Expr1038667 | |||||||||
| Expr1038668 | |||||||||
| Expr1155226 | |||||||||
| Expr1155227 | |||||||||
| Expr2005494 | |||||||||
| Expr2023714 | |||||||||
| Drives_construct | WBCnstr00025467 | ||||||||
| WBCnstr00025468 | |||||||||
| Construct_product | WBCnstr00025467 | ||||||||
| WBCnstr00025468 | |||||||||
| Microarray_results (46) | |||||||||
| Expression_cluster (265) | |||||||||
| Interaction (81) | |||||||||
| Map_info | Positive | Positive_clone | R08E3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -6.22681 | |||||||
| Reference | WBPaper00058665 | ||||||||
| WBPaper00065331 | |||||||||
| Method | Gene |
