WormBase Tree Display for Gene: WBGene00006652

WBGene00006652 SMap: S_parent: Sequence: Y113G7A
  Identity: Version: 1
    Name: CGC_name: ttx-1 Person_evidence: WBPerson1417
      Sequence_name: Y113G7A.6
      Molecular_name (12)
      Other_name: EH67 Paper_evidence: WBPaper00000161
        PR767 Paper_evidence: WBPaper00000680
        CELE_Y113G7A.6 Accession_evidence: NDB BX284605
      Public_name: ttx-1
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:41 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info (11)
  Disease_info: Potential_model: DOID:0111806 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:8522)
      DOID:9410 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:8522)
  Molecular_info: Corresponding_CDS: Y113G7A.6a
      Y113G7A.6b
      Y113G7A.6c
      Y113G7A.6d
    Corresponding_CDS_history (2)
    Corresponding_transcript: Y113G7A.6a.1
      Y113G7A.6b.1
      Y113G7A.6c.1
      Y113G7A.6d.1
    Other_sequence (37)
    Associated_feature (15)
    Gene_product_binds: WBsf980903
      WBsf980905
      WBsf980906
    Transcription_factor: WBTranscriptionFactor000216
  Experimental_info: RNAi_result: WBRNAi00065644 Inferred_automatically: RNAi_primary
      WBRNAi00055387 Inferred_automatically: RNAi_primary
      WBRNAi00055388 Inferred_automatically: RNAi_primary
      WBRNAi00106223 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr2375
      Expr2376
      Expr2377
      Expr11109
      Expr15640
      Expr1023079
      Expr1158904
      Expr1170081
      Expr2017628
      Expr2035768
    Drives_construct: WBCnstr00001298
      WBCnstr00006449
      WBCnstr00010798
      WBCnstr00010799
      WBCnstr00010800
      WBCnstr00018505
    Construct_product: WBCnstr00007878
      WBCnstr00007880
      WBCnstr00010798
      WBCnstr00010799
      WBCnstr00010800
      WBCnstr00018505
      WBCnstr00020155
    Microarray_results (32)
    Expression_cluster: WBPaper00035197:fer-1_downregulated
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:excretory-cell_larva_enriched
      WBPaper00037950:excretory-cell_larva_SelectivelyEnriched
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_larva_SelectivelyEnriched
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00042561:smg-2(RNAi)_upregulated
      WBPaper00044037:eat-2_upregulated
      WBPaper00044260:1-methylnicotinamide_downregulated
      WBPaper00044260:nicotic-acid_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00046805:csr-1(RNAi)_upregulated_Set1
      WBPaper00047132:skn-1(RNAi)_downregulated
      WBPaper00048988:neuron_expressed
      WBPaper00049489:AMsh-glia_enriched
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00050332:skn-1(RNAi)_downregulated
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00050990:intestine_enriched
      WBPaper00050990:intestine_expressed
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
      WBPaper00053321:PGCs_depleted_NuGen
      WBPaper00053664:ins-11(tm1053)_downregulated
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055354:eat-2(ad1116)_upregulated
      WBPaper00055354:Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rifampicin_upregulated
      WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_upregulated_N2
      WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
      WBPaper00056284:ints-1(RNAi)_downregulated
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056826:hmc_biased
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058711:paraquat_downregulated
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059421:daf-1(m40);daf-3(mgDf90)_downregulated
      WBPaper00059421:daf-3(mgDf90)_downregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
      WBPaper00061203:let-418(n3536)_upregulated
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:AFD
      WBPaper00061340:AIM
      WBPaper00061340:AMsh
      WBPaper00061340:AMso
      WBPaper00061340:ASI_parent
      WBPaper00061340:Excretory_duct_and_pore
      WBPaper00061340:M1_parent
      WBPaper00061340:mc1
      WBPaper00061340:mc2
      WBPaper00061340:mc3
      WBPaper00061340:Neuroblast_AFD_RMD
      WBPaper00061340:Neuroblast_ASG_AWA
      WBPaper00061340:Neuroblast_ASH_RIB
      WBPaper00061340:Neuroblast_AVG_RIR
      WBPaper00061340:Neuroblast_AWC_SAAVx
      WBPaper00061340:Parent_of_exc_duct_pore_DB_1_3
      WBPaper00061340:Pharyngeal_intestinal_valve
      WBPaper00061340:Pharyngeal_marginal_cell
      WBPaper00061340:RIB
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061527:ceh-22_3981-inx-6
      WBPaper00061527:sol-1-jnk-1_18695
      WBPaper00061651:AFD_enriched
      WBPaper00061651:PHso_enriched
      WBPaper00061818:AFD_enriched_protein
      WBPaper00061902:camt-1(ok515)_regulated_RMG
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:etr-1(lq61)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062345:bortezomib_4h_downregulated_N2
      WBPaper00062440:crh-1(n3315)_downregulated
      WBPaper00062590:Aging_upregulated_intestine
      WBPaper00062590:Aging_upregulated_neuron
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064306:Agaro-oligosaccharides_upregulated
      WBPaper00064494:postdauer_upregulated_AWA
      WBPaper00064716:paraquat_downregulated
      WBPaper00064871:hypoxia_downregulated_F1
      WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
      WBPaper00065029:cadmium_upregulated
      WBPaper00065158:AFD_enriched
      WBPaper00065749:endu-2(tm4977)_upregulated
      WBPaper00065835:Day5_vs_Day1_downregulated
      WBPaper00065841:30_4
      WBPaper00065841:34_0
      WBPaper00065841:34_1
      WBPaper00065841:35_0
      WBPaper00065841:45_0
      WBPaper00065841:56_0
      WBPaper00065841:79_2
      WBPaper00065841:94_0
      WBPaper00065841:121_0
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
      WBPaper00066232:ash-2(RNAi)_upregulated_WT
      cgc4489_group_20
      WBPaper00005124:testosterone_10-9M_regulated
      WBPaper00024671:AFD_AWB_vs_unsorted_upregulated
      WBPaper00024671:AFD_vs_AWB_upregulated
      WBPaper00025141:unc-4::GFP_Enriched_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00030839:Embryo_A_Class
      WBPaper00030985:Erwinia_carotovora_upregulated
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:hlh_1_enriched
      WBPaper00031003:total_muscle_depleted
      WBPaper00031832:slr-2_regulated
      WBPaper00035588:alg-1(-)_upregulated
      WBPaper00036123:Fluoranthene_regulated
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_24h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00041960:N2_fasting_upregulated_anytime
      WBPaper00045673:colistin_upregulated
      WBPaper00046853:AOBr_M.aeruginosa-batch-culture_downregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      WBPaper00050767:Octopamine_induced
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00057098:SiO2-nanoparticles_upregulated
    Interaction (108)
    Anatomy_function: WBbtf1113
      WBbtf1114
    WBProcess: WBbiopr:00000025
  Map_info: Map: V Position: 24.5199 Error: 0.016963
    Positive: Positive_clone: Y113G7A Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4325
        4745
        5371
    Pseudo_map_position
  Reference (90)
  Remark: Sequence connection from [Satterlee JS, Sengupta P]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene