WormBase Tree Display for Gene: WBGene00006597
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| WBGene00006597 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y37A1B | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | tor-1 | Person_evidence | WBPerson87 | |||||
| Sequence_name | Y37A1B.12 | ||||||||
| Molecular_name | Y37A1B.12 | ||||||||
| Y37A1B.12.1 | |||||||||
| CE43294 | |||||||||
| Y37A1B.12.2 | |||||||||
| Other_name | dyt-2 | ||||||||
| CELE_Y37A1B.12 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | tor-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tor | ||||||||
| Allele (39) | |||||||||
| Component_of_genotype | WBGenotype00000148 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Contained_in_operon | CEOP4572 | ||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00003870 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00006598 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | tor-1 encodes a AAA+ ATPase that, along with TOR-2 and OOC-5, comprise the three C. elegans orthologs of human TorsinA. | Paper_evidence | WBPaper00005005 | |||||
| WBPaper00005722 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 16 Jun 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable ATP binding activity and ATP hydrolysis activity. Predicted to be involved in cellular response to misfolded protein. Predicted to be located in endoplasmic reticulum lumen. Expressed in anal depressor muscle; head mesodermal cell; head neurons; and intestinal muscle. Human ortholog(s) of this gene implicated in arthrogryposis multiplex congenita-5 and torsion dystonia 1. Is an ortholog of human TOR1A (torsin family 1 member A) and TOR1B (torsin family 1 member B). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080981 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3098) | ||||
| DOID:0060730 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3098) | ||||||
| Modifies_disease | DOID:10652 | ||||||||
| Modifies_disease_in_annotation | WBDOannot00000218 | ||||||||
| Molecular_info | Corresponding_CDS | Y37A1B.12 | |||||||
| Corresponding_CDS_history | Y37A1B.12:wp196 | ||||||||
| Corresponding_transcript | Y37A1B.12.1 | ||||||||
| Y37A1B.12.2 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055848 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00076762 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr11291 | ||||||||
| Expr1020300 | |||||||||
| Expr1159379 | |||||||||
| Expr2017460 | |||||||||
| Expr2035599 | |||||||||
| Drives_construct | WBCnstr00018741 | ||||||||
| WBCnstr00034281 | |||||||||
| Construct_product | WBCnstr00034281 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (49) | |||||||||
| Interaction (31) | |||||||||
| WBProcess | WBbiopr:00000078 | ||||||||
| Map_info | Map | IV | Position | 11.0294 | Error | 0.008674 | |||
| Positive | Positive_clone | Y37A1B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005005 | ||||||||
| WBPaper00005722 | |||||||||
| WBPaper00006152 | |||||||||
| WBPaper00012397 | |||||||||
| WBPaper00017955 | |||||||||
| WBPaper00017956 | |||||||||
| WBPaper00024947 | |||||||||
| WBPaper00025671 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Sequence connection from [Caldwell GA] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
